Hydrogenovibrio marinus: HVMH_1218
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Entry
HVMH_1218 CDS
T06677
Name
(GenBank) hypothetical protein
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HVMH_1218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmar03400
]
HVMH_1218
Enzymes [BR:
hmar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HVMH_1218
DNA repair and recombination proteins [BR:
hmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HVMH_1218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TBCA
POX
DUF7200
Motif
Other DBs
NCBI-ProteinID:
BBN59624
LinkDB
All DBs
Position
complement(1307683..1307901)
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AA seq
72 aa
AA seq
DB search
MAQSTENSYQKNYEKLQEIAQKLSQSDNIDIDELVPMVDEATRAYTLCQSRIEAVESALN
KRLDKVDDDSED
NT seq
219 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagtacagaaaacagttaccaaaaaaactatgagaaattgcaggaaattgca
caaaagctctctcaatcagacaatattgatatagatgagttggtgccaatggttgatgaa
gccactcgtgcttacaccttgtgtcagtcacgtattgaagccgtggaatctgcgctgaat
aagcgactcgacaaagtggatgacgatagcgaagactag
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