Hydrogenovibrio marinus: HVMH_1264
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Entry
HVMH_1264 CDS
T06677
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar00541
Biosynthesis of various nucleotide sugars
hmar01100
Metabolic pathways
hmar01250
Biosynthesis of nucleotide sugars
Module
hmar_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HVMH_1264 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hmar01005
]
HVMH_1264 (kdsA)
Enzymes [BR:
hmar01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
HVMH_1264 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
hmar01005
]
Lipid A
HVMH_1264 (kdsA)
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GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
BBN59670
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Position
complement(1354235..1355071)
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AA seq
278 aa
AA seq
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MNLCGFEVGIDKPLFLIAGPCVIESEQLAIDTAGQLKEMTDALGMPFIFKSSYDKANRSS
TKSFRGLGIEEGLRILQKVKDEVGVPVLTDVHEDTPLEEVASVVDVMQTPAFLVRQTNFI
QNVCRQGLPVNIKKGQFQAPWDMDQVVAKAREVGNEQIMVCDRGTSFGYNTLISDMRGLA
SMRSTGCPVVFDATHSVQQPGGQGTTSGGQREMVPVLARAAIAAGISGVFMETHPDPANA
LSDGPNMWPLGKLMPLLETMKRLDDVVKTQGFIENELL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaatctatgtggctttgaagtaggtattgataaacctttatttttaatcgcaggtcct
tgcgttatcgagtctgaacagttggcaattgatactgccggtcagcttaaagagatgaca
gatgctttggggatgccttttatctttaagtcgtcttatgacaaagccaatcgttcctcg
acaaaaagctttagagggcttgggatcgaagaggggcttcgaattcttcagaaagtaaaa
gatgaagtcggcgtacctgttttaactgacgtccacgaagatacaccgcttgaagaagtg
gcatctgtggttgatgtgatgcaaacccctgcgtttttggtaagacaaaccaactttatc
caaaacgtgtgtcgccaagggcttccggtaaatattaagaaagggcagtttcaagcacct
tgggatatggatcaagtagttgctaaagcaagagaagttggaaatgagcaaattatggtt
tgtgatcgcggaacttcttttggttacaacactctgatttcggatatgagaggcttggct
tcaatgagaagtaccggttgtcctgtcgtgtttgatgcgacgcattcagtccagcagccg
ggcggtcaaggaacgacttctggtggtcaaagagaaatggtgccggtattggcgcgtgca
gcaattgctgcaggtatttcaggtgtatttatggaaacgcaccctgatccagcgaatgca
ttgtctgatgggcctaacatgtggccgcttggcaagctaatgccactgctagaaacaatg
aagcgacttgatgacgttgttaaaacgcaaggctttattgaaaacgaattactgtaa
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