KEGG   Hydrogenovibrio marinus: HVMH_1272
Entry
HVMH_1272         CDS       T06677                                 
Symbol
yoaA
Name
(GenBank) helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
hmar  Hydrogenovibrio marinus
Brite
KEGG Orthology (KO) [BR:hmar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hmar03400]
    HVMH_1272 (yoaA)
Enzymes [BR:hmar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     HVMH_1272 (yoaA)
DNA repair and recombination proteins [BR:hmar03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HVMH_1272 (yoaA)
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 Helicase_C
Other DBs
NCBI-ProteinID: BBN59678
LinkDB
Position
complement(1363056..1364990)
AA seq 644 aa
MSLITETQDLLTNDAKLKRLITDFEVRSSQLEMSLEVAKSIEEKSVLLAEAGTGTGKTFA
YLIPALLSGKKVIISTATKNLQEQLLSKDIPLIKQLCGFKGSVKLLKGRENYLCPQRLEI
AETTEQNTRSVWQKLSLIHDWMEKTHAGDKAELNTLDENDPIWHKVCARLEFCQANGCHA
DSDCFYPKVKQDAVESDVLIVNHHLFCADLALRENGFGELLPEADVYIFDEAHQLPDIAA
QFLGFTLSRGQFDELARDMRNAVVQEAKESADMLDAAKQLELSVQQFNEILGKWEKRWNW
ESFSAHAKSIDGLDAILDCLKKIEEGLKPFLDRGKSIAAVQKRAQDMADQLRRWLTSNSQ
NEVRWVDSSQARFRLNFTPMSVSEPFSKQRDILGGAWIFTSATLSVNGQFDYFSRRLGLE
DGRALQWDSPFDYLKQGLIYHPVGLPDPKSPDYIKICLRAIWPLLQASEGNAFLLFTSHR
ALMEANSILKDHWDGSLFVQGDAPKHDLLLQFRKSERSILLGTSSFWEGVDVKGDDLKLV
MIDRIPFIPPDDPVVQARETALKQQGLNAFYAFQIPEAIIALKQGTGRLIRSTEDKGVLV
LCDPRIMTKPYGKAIINSLPRFRWVYEPTEAKQLLNDMSERTND
NT seq 1935 nt   +upstreamnt  +downstreamnt
ttgtctttaataacagaaactcaagatctgctaacaaacgacgctaagcttaagcggttg
attacagattttgaagtgcgatcttctcagctagaaatgtctttagaggtcgcgaagtcc
attgaagaaaaaagtgttttgttggcggaagcagggacagggacaggaaaaaccttcgcc
tatctcattcccgctttgctttccggtaaaaaggtcattatttcgaccgcaaccaagaat
ttgcaagaacaactactttcaaaagatattccattaatcaaacaattgtgtggctttaag
ggctcagttaagcttttgaaaggtcgagaaaactatctttgcccgcaacggcttgagatt
gccgaaacaacagaacaaaatacacgttctgtctggcagaaactatctctaattcatgac
tggatggagaaaacgcatgctggtgataaagcagaattaaacactcttgatgaaaacgat
cctatatggcataaggtgtgcgccagattagagttttgtcaggcaaatggttgtcatgct
gactcagattgtttttatcctaaagtgaagcaagacgctgttgagtcagatgtcttgata
gtcaatcaccacctgttttgtgcggatttggcattaagagaaaatggcttcggtgagtta
cttccagaggctgatgtttatatttttgatgaagcacatcagctacctgatattgcagca
caatttcttggctttaccttgtccaggggacagtttgatgaactggctagagatatgcgg
aatgctgttgttcaagaggcaaaagaatcggcagacatgttggatgcagccaagcagtta
gagctctcagtgcagcagtttaatgaaatactcggtaaatgggaaaaacgttggaattgg
gaaagtttttcggcacacgccaaatcaatagatggcttggacgcgattcttgattgcctt
aaaaagatagaggagggcctcaagcctttccttgatagaggcaagtcaattgcagctgtt
caaaagcgtgctcaggatatggcagatcaattgaggcgttggttaacctcaaactcacaa
aatgaagtgcgttgggttgattcttcgcaggcacgttttaggctgaactttacgccgatg
agtgtgtctgaaccttttagcaagcaaagagatattttaggtggcgcttggatttttact
tcggcaaccttaagtgtaaatggtcagttcgattatttttcaagacgattagggcttgaa
gatgggcgagcactacagtgggacagcccgtttgattatttaaaacaagggttgatctac
catcctgttggtttacctgaccccaaatcccctgactatatcaagatatgcctaagagca
atatggccgcttctgcaagccagtgaaggaaatgcatttcttttatttaccagtcaccgg
gctttgatggaagccaattcaattttgaaagatcattgggatggtagtttgtttgtgcaa
ggtgatgcgccaaagcatgatttactacttcaattccgaaaatcagagcgatcaatctta
ctaggtacaagtagcttttgggaaggtgttgatgtgaaaggggatgatcttaaactggta
atgattgataggattccctttattccaccagatgatcctgtggttcaagcaagagaaacc
gcccttaagcagcaagggctgaatgcattttatgcatttcagattcccgaggctattatt
gctttgaagcaaggaacaggtaggctgatccgttcaacagaagacaaaggggttttggtg
ctgtgcgaccccagaattatgacaaaaccttatggaaaagcgataataaatagtttgcca
aggtttagatgggtctacgaacccactgaggcaaagcaactgttaaatgatatgtcggaa
agaacaaatgactaa

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