Hydrogenovibrio marinus: HVMH_1294
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Entry
HVMH_1294 CDS
T06677
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar00300
Lysine biosynthesis
hmar01100
Metabolic pathways
hmar01120
Microbial metabolism in diverse environments
hmar01230
Biosynthesis of amino acids
Module
hmar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HVMH_1294 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hmar01002
]
HVMH_1294 (dapE)
Enzymes [BR:
hmar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HVMH_1294 (dapE)
Peptidases and inhibitors [BR:
hmar01002
]
Metallo peptidases
Family M20
HVMH_1294 (dapE)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
BBN59700
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Position
1385359..1386498
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AA seq
379 aa
AA seq
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MNMSETIKLAQQLIQIDSVTPDDKGCQKLISDFLTPLGFKTEQMNFGDVSNLWARHGTET
PFIVFAGHTDVVPTGPVEKWSHPPFSASVENEMLIGRGSADMKSSIACFMIATQRFLNNY
PNCKGSIGFLITSDEEGPAIDGTVKVIETLEARNEKFDYCLVGEPSSSKKLGDSIKNGRR
GSLSGKLRIKGIQGHIAYPELALNPIHTLAPALQKLTETVWDNGNEYFPPTSFQVSNIHS
GTGATNVIPGDCVLDFNFRFSTEQTPDSLKSGVHAILDSYQLNYELDWNLSGMPFITPAE
GELIQAINKAVQSEMGYEPELSTGGGTSDGRFIAPTGAQVIELGPLNDTIHKVNEQVSVK
DLEKLTDIYYQTLINLLVN
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
ttgaacatgagtgaaacaatcaaactcgcgcaacaactgatccaaatcgactcagtcaca
cctgatgacaaaggttgccagaaactcatctctgattttcttactcctttaggctttaaa
actgaacaaatgaactttggtgatgtatctaacctgtgggctcgtcatggaactgagaca
ccatttattgtatttgctggtcatactgatgtagttcccactggtcctgtagaaaaatgg
tctcacccgcctttctctgcctcggtagaaaatgaaatgttgattggccgtggctctgcg
gatatgaaaagcagtatcgcgtgttttatgattgctacacagcgtttcttaaacaactat
cctaactgcaagggctctattggttttttgattaccagtgatgaagaaggtcctgcgatt
gatggcaccgtaaaagttatcgaaacacttgaagccagaaacgaaaagttcgactactgc
ctagttggagaaccatcaagcagtaaaaaacttggagactccattaaaaacggacgccga
ggctctcttagcggaaagctgcgtattaaaggcattcaagggcatatagcttacccagaa
ctggctctcaaccctattcacacgctcgcaccggcattgcaaaaactgacggaaactgtc
tgggataatgggaatgaatattttcctccgacatctttccaagtatccaacattcactcg
ggcacaggcgccaccaatgtcattcctggtgattgtgttttagattttaatttccgtttc
tcaactgaacaaacgcccgattcacttaagtctggtgtccacgcaatactggatagttac
cagttaaactatgaactggattggaatttgtcaggcatgccgtttattacacctgctgaa
ggtgaactcattcaagctattaacaaagcggttcaatcggaaatgggttacgagccagaa
ctttcaaccggtggcggaacatctgatggtcgttttattgcccctactggtgcacaagta
attgagctaggtccactaaacgacaccattcataaggttaatgaacaagttagtgtcaaa
gacttagaaaaattaacggatatttattaccaaacattgataaacctattggtaaactaa
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