Hydrogenovibrio marinus: HVMH_1299
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Entry
HVMH_1299 CDS
T06677
Symbol
ynaI
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K16052
MscS family membrane protein
Organism
hmar
Hydrogenovibrio marinus
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hmar02000
]
HVMH_1299 (ynaI)
Transporters [BR:
hmar02000
]
Other transporters
Pores ion channels [TC:
1
]
HVMH_1299 (ynaI)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Msl2-3_C
MSL2_3
DUF4083
Motif
Other DBs
NCBI-ProteinID:
BBN59705
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Position
complement(1389747..1390985)
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AA seq
412 aa
AA seq
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MSSLQDPSTVDLVTEPVKHHSPTLFEDITFSGFSELIKMFPDTWLALTQFFGSYAWLLLL
LIILGFTFVIDFVIRMVLSRVVRYLQHRKKEVAKTFFVALKSPFSFYIWLSGTVFALNTI
LVTFKVFTDFVPYINGFKSSLALIAVAWFSIRWVQRIESYLKRLERSNSKWDPVTLEALA
KIFKLTVFIITGIFVLSGLGVNLTGLIAFGGIGGVAVGFAAKDLVSNVLGGLMLYMDKPF
VTGDWIRSPDKEIEGTVESIGWRMTIVRTFDKRPLYIPNGMFATISIENPSRMTNRRIKE
TIGVRYCDIGQVSKITSEIKTMLQEDPDIDSNQTLIVSFNGFGASSLDLLVYTFTKTIVW
IEYHEVKEKILLKIAEIIDNHGAEIAFPTRTLYMEDSVKLEQVANAEQGKKK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtttgcaagatccatccacagttgatttggtaacggagccggtgaaacatcat
tctccaacattgtttgaggatattactttttcagggttttctgagctgattaaaatgttc
ccagacacttggcttgcgttgacacagttttttggctcttatgcctggctcttgctgttg
ctaattattctaggctttaccttcgttatcgattttgtgattcgcatggtattgtctcgt
gtggttcgctatcttcagcatcgaaaaaaggaagtggcgaagaccttttttgttgcgttg
aaatcgccgttttccttctacatatggttgtctgggacagtattcgctctgaatacaata
ctggtaacttttaaggtctttaccgattttgttccttatatcaatggctttaaatcttcc
ctcgcgctgattgcggtggcttggttctcgattcgctgggttcagcggatcgagagttat
ttaaagcgtttagagcgttcgaacagcaagtgggatccagtgacacttgaagctttggca
aaaatattcaagctgacggtttttatcattaccggtatttttgtactgagtggtctaggg
gttaatctgactggactgattgcctttggtggtattggtggtgtggctgtcggtttcgct
gccaaggacttggttagtaatgtgctgggtggtttgatgctttatatggataagccattc
gtgactggagattggattcgatcacctgataaagaaattgaagggactgtagaaagcatc
ggttggcgaatgacgatcgtcagaacatttgataagcgcccgctgtatatcccaaacggc
atgtttgccaccatttctattgaaaacccatcgcgaatgactaatcgtcgtatcaaagaa
acgattggtgttcgatattgtgatatcggtcaggtgtcgaaaatcacgtctgaaattaaa
actatgcttcaggaggatccagacatagacagcaatcaaaccctgattgtcagtttcaac
gggtttggcgcatcgtctctggatttattggtttacacctttaccaaaacgatagtttgg
attgagtaccatgaagtgaaagaaaagatactgcttaaaatcgcggaaatcattgataac
cacggtgcggaaattgccttcccgaccagaacgctttatatggaagactcagtcaaactt
gagcaggtggcgaatgctgagcaggggaagaaaaagtaa
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