Hydrogenovibrio marinus: HVMH_1318
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Entry
HVMH_1318 CDS
T06677
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hmar
Hydrogenovibrio marinus
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmar03009
]
HVMH_1318 (rimO)
Enzymes [BR:
hmar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HVMH_1318 (rimO)
Ribosome biogenesis [BR:
hmar03009
]
Prokaryotic type
ribosomal protein modification factors
HVMH_1318 (rimO)
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Ortholog
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
BpuJI_N
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
BBN59724
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Position
complement(1406501..1407877)
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AA seq
458 aa
AA seq
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MSQSQPTVGIVSLGCPKATVDSERILTQLKAEGYHLTNSYQDADTVIVNTCGFIDSAVQE
SLDTIGEALAENGKVIVTGCLGGKEDNQIKEIHPKVLAVSGPAAYEEVLTAVHNVIAPPQ
HNPFVDLVPPQGIKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVSDVIAEAKRL
KEAGVKELLVVSQDTAAYGVDVKYKTEFADGRPTKTSMVGLSEALGELGGVDEFWVRLHY
VYPYPNVEDVIPLMAEGKILPYLDMPLQHAHPRVLKAMKRPGNVEKTLERIQKWREQVPD
LTIRSTFIVGFPGETEEEFQTLLDFIAEARLDRVGCFQYSPVEGAVANDLAEQVPDDVKQ
DRFDRFMQLQQQISAEKMQAKIGKRIQVLVDEVDEEGAIARSRADAPEIDGLVFIPDGHH
LNPGEFVEVEVFAADEYDLWANPVGDFVPQETSFIELG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaatcacaacctacggtcggtatcgtcagcttaggctgccctaaagctacggtc
gactcggaacgcattctgacgcaattgaaagcagaagggtatcacctgacaaatagttat
caggatgccgataccgtcatcgtcaatacgtgcgggtttatcgacagcgctgtgcaggag
tcattggataccatcggtgaggcattggctgagaacggcaaggtaatcgttactggttgt
ttgggtggtaaggaagacaatcaaattaaggaaatccatcctaaggtattggcggtttcc
ggcccggctgcttacgaagaagtgttgaccgccgttcacaatgtgattgcgccgccacaa
cataatccattcgtggatttggttccccctcaaggcattaagctgacaccaaaacactat
gcttatctgaaaatatccgaaggctgtaaccaccgttgtactttctgcattatcccgtcc
atgcggggggatttggtcagccgacctgtgtcggatgtcattgctgaagccaaacgcctg
aaagaagccggtgttaaagagttgttggtggtgtcacaagacactgcggcttatggtgtg
gatgtgaaatacaaaaccgagtttgcggatggacgtcctaccaaaacctcaatggttggc
ttgtctgaagcgcttggtgaactgggtggggttgatgagttctgggtgcgtttgcattat
gtttacccttacccgaatgtagaggatgttattccgttgatggcggaaggcaaaatcctg
ccttatctggatatgccattgcagcatgctcacccgcgcgtgcttaaagcaatgaagcgc
ccgggcaatgtcgaaaagactctggaacgtatccaaaagtggcgtgagcaggtaccagac
ctgaccattcgctctacattcattgtcggcttcccgggggaaacggaagaagagtttcaa
actctattggatttcattgcagaagcaaggctggatagagtcgggtgtttccaatactct
ccggttgaaggggctgtggcgaatgacttggcggaacaggtgccggatgacgtcaaacaa
gaccgtttcgatcgctttatgcaactacagcaacaaatcagtgcagagaagatgcaagcc
aaaattggcaagcgtatccaagtactggtagatgaagtggacgaagagggtgcgattgct
cgctcaagagcggatgcccctgaaattgatggattggttttcattccagacgggcatcac
cttaacccgggtgagtttgtcgaggtcgaagtttttgctgcggatgaatatgatttgtgg
gcaaaccctgttggtgatttcgtacctcaggaaacgtcatttattgaattgggttaa
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