Hydrogenovibrio marinus: HVMH_1369
Help
Entry
HVMH_1369 CDS
T06677
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HVMH_1369 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmar03019
]
HVMH_1369 (rhlE)
Enzymes [BR:
hmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HVMH_1369 (rhlE)
Messenger RNA biogenesis [BR:
hmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HVMH_1369 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Fn3_Dep-1_5th
AAA_22
ERCC3_RAD25_C
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BBN59775
LinkDB
All DBs
Position
1456148..1457542
Genome browser
AA seq
464 aa
AA seq
DB search
MKFTELGLNAQITQAIANTGYTTPTPIQAQAIPAVLEGHDVMAAAQTGTGKTAAFTLPLL
ENLSKGPKAKSNQARALILTPTRELALQVSESVETYGKELTLTSAVVYGGVKINPQMQRL
RKGADILVATPGRLLDLYQQNAVRFDHLEVLILDEADRMLDMGFIRDIKKILTLLPKKRQ
NLLFSATFSNEIRELAKGLVHNPVEISVTPKNSTAETIKQKIYPVDKAQKTKLLIQLIKD
HAWYQVLVFTRTKHGANRLATQLDKSGIKADAIHGNKSQNARVRALNGFKENKLQVLVAT
DIAARGIDIDLLPHVVNFDLPHVSEDYVHRIGRTGRAGESGEAISLVCAEEFQELVGIEN
LINQILPREIVPGFEPKNPLGESKIGLKPKKPKKPKKPKVFEDKPAGKAPASPRKSPDKR
NTGGKQNENRTNKRTGNDSPYRKGSKPNSSGRNRKPANAQNTNS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaccgaacttggcttaaatgcccaaattacacaagccattgcaaacactggc
tatacgacaccgacccctattcaggcgcaggcaatccctgctgtcttggaagggcacgat
gtcatggcagctgcccaaacgggtacaggaaaaaccgccgcctttacacttcccttgctt
gaaaacctttccaaaggacctaaagcaaaatcaaaccaagcacgtgcgttgattctaacg
cctacacgtgagcttgcgttgcaagtcagtgagagtgttgaaacctatggcaaagagctc
acactaacctctgctgtggtttacggtggtgtgaagatcaatccgcaaatgcaacgccta
cgtaaaggtgcagacattttggttgccacacccggcagactgcttgatctttatcagcaa
aatgctgtgcgcttcgatcacttggaagtactcatcttggacgaagccgaccgtatgttg
gatatgggctttattcgcgacatcaaaaagattctgacgctgctgcctaaaaagcgccaa
aacctgctgttttcagccaccttctccaatgagattagagagctggcaaaaggtctggtt
cataatccagtcgagatttcggttaccccgaaaaactctaccgcagaaaccattaaacaa
aaaatctaccccgtcgacaaagctcaaaaaaccaaattactgatccagctcattaaagac
catgcctggtaccaagtgctggtctttacccgcacaaaacatggtgcaaaccgactggcc
acgcaattggataaaagtggtatcaaagccgatgccattcatggcaataaaagccaaaat
gcgcgagttcgcgcattgaatggttttaaggaaaacaagttacaggtgctggttgctacg
gacatcgccgcacgcggtattgatattgatttgctaccccatgtggtgaacttcgattta
ccgcatgtatctgaagattacgtgcaccgtatcggcagaacaggtcgtgcgggtgagagt
ggtgaagccatctctctggtatgtgcggaagaattccaagaactggtcggcattgaaaac
ctgatcaatcaaattctaccaagggaaatcgttcctggtttcgagccgaaaaacccactg
ggagaatccaaaatcggtctcaaaccgaagaagcccaaaaagcctaaaaaaccaaaagtg
tttgaagacaagccagcaggcaaagcacccgcttcgccacgcaaaagtcctgacaaacgc
aatacaggcggtaaacaaaacgagaaccgtacgaacaaaagaacgggcaatgactcccct
taccgcaagggctctaagcctaattcttctgggcgcaatcgcaaacctgcaaacgctcaa
aacaccaattcataa
DBGET
integrated database retrieval system
