Hydrogenovibrio marinus: HVMH_1591
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Entry
HVMH_1591 CDS
T06677
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hmar
Hydrogenovibrio marinus
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmar03016
]
HVMH_1591 (truA)
Enzymes [BR:
hmar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HVMH_1591 (truA)
Transfer RNA biogenesis [BR:
hmar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HVMH_1591 (truA)
Prokaryotic type
HVMH_1591 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BBN59997
LinkDB
All DBs
Position
complement(1684782..1685567)
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AA seq
261 aa
AA seq
DB search
MRIALGVEYQGGAYCGWQYQDHCDSVQKYLQSALSFIADEPIEVHCAGRTDTGVHAIGQV
VHFETKSTRLGRAWVQGTNTKLPYDIRVAWARTVSDDFHARFSAVARQYRYVIFNRPVHS
AVLSGRVTWERLPLDEMAMHKAAQTLVGEHDFSSFRAAGCQANHAIREVQSVQVSRHDDF
VFVDIQANAFLHHMVRNIVGTLLEVGRGEKQGEWLQTLLDKQDRTQAGVTAPAEGLYFVN
AIYPDKFDMPKTELDAVLWQG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcgctttaggggttgaatatcaaggtggtgcctattgcggttggcagtatcaa
gaccattgcgactcggtacaaaaatatttgcagtccgcattaagctttattgctgacgaa
cctattgaagttcattgcgcaggcagaacggatacaggtgttcatgcgatagggcaggta
gtgcatttcgagacaaaatctaccaggttggggcgtgcatgggttcaaggcaccaatacc
aagctgccttacgacattcgcgttgcttgggctcgtacggtttcagatgactttcatgcc
cgctttagcgcagtggcaaggcaatatcgctatgtaatctttaatcgtcctgtccattcg
gcagttttatccggtcgagtgacctgggagagactaccattggatgagatggctatgcat
aaagcggctcaaacattagttggtgaacatgacttttcttcgtttcgagccgcgggctgt
caggcaaatcatgccattcgagaggtacagtctgttcaagtaagtcgacatgatgacttt
gtttttgtcgacattcaagcaaacgcgtttttacatcatatggtacggaatattgtagga
accttgctggaagtgggcagaggtgaaaagcagggtgaatggttgcaaaccctgcttgat
aaacaggatcggacacaagctggcgttaccgcacccgctgaagggttgtacttcgtcaat
gcaatttatccagataagtttgatatgccaaagacagaactcgatgcagtgctctggcaa
ggataa
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