KEGG   Hydrogenovibrio marinus: HVMH_1975
Entry
HVMH_1975         CDS       T06677                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
hmar  Hydrogenovibrio marinus
Pathway
hmar00300  Lysine biosynthesis
hmar00470  D-Amino acid metabolism
hmar01100  Metabolic pathways
hmar01110  Biosynthesis of secondary metabolites
hmar01120  Microbial metabolism in diverse environments
hmar01230  Biosynthesis of amino acids
Module
hmar_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:hmar00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HVMH_1975 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HVMH_1975 (dapF)
Enzymes [BR:hmar01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     HVMH_1975 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: BBN60381
LinkDB
Position
complement(2100344..2101183)
AA seq 279 aa
MGAKLHFSKMHGLGNDFMVIDAIAQDVLLSAEQIRGWADRHFGVGFDQLLLVEATDTDGV
DFRYRIFNADGSEVQQCGNGARCFAKFVYDKGLTDKTEITVETASGVIVLYITENGEVRV
NMGAPNFAPNSLPFSVPGESDVYQLEVDGEFYQIGAVSMGNPHAVLRVTDLGAAPVAELG
AKIESHAHFPERVNVGFAECIDSGHIKLRVYERGAAETLACGTGACAAMVSLRKLGEVAD
EVKVSLPGGDLTIAWDGDASHPVWMTGPAVMVFDAEIAL
NT seq 840 nt   +upstreamnt  +downstreamnt
atgggcgctaagctccacttcagtaaaatgcatggacttggaaacgactttatggtgatt
gatgccattgctcaggacgttttattgtctgctgaacaaattcgcggatgggcggataga
cactttggtgtggggttcgatcagttattattggttgaagcaacggataccgacggggtg
gattttcgttatcgaattttcaatgcggatggttccgaagtgcagcagtgcggtaatggt
gcgcgctgtttcgcgaagtttgtttacgacaaagggttgaccgacaaaaccgaaatcacg
gttgagacggcttctggcgttattgtgctttatatcactgagaacggagaggttagggtc
aatatgggggcaccgaactttgcaccaaacagtttgccattttctgtgccgggtgagtct
gatgtttaccaattggaagtggatggtgagttttaccaaatcggcgcagtctctatggga
aacccgcatgcggttttgcgtgtcacggatttgggggcggcgccagtagcagaattgggt
gcgaaaattgaatcccatgcacattttccagaaagggtgaatgtcggttttgctgagtgt
attgattcaggccatattaagttgcgtgtctatgaacgtggagcagctgaaacccttgca
tgtggaacaggggcttgcgctgcgatggtaagtttgcgtaagctgggagaagtcgctgac
gaggtcaaggtttctttacctggcggtgatttgaccattgcttgggatggtgatgcgtca
catcctgtttggatgacggggccagcggtgatggtgtttgatgccgaaatagcgctctaa

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