KEGG   Hominenteromicrobium mulieris: ACI0CA_12800
Entry
ACI0CA_12800      CDS       T10961                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
hmb  Hominenteromicrobium mulieris
Pathway
hmb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hmb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACI0CA_12800 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hmb03019]
    ACI0CA_12800 (rny)
Messenger RNA biogenesis [BR:hmb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ACI0CA_12800 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KH_PNO1_2nd HDOD KH_KhpA-B KH_NusA_2nd KH_2 KH-I_KHDC4-BBP Phage_holin_3_6
Other DBs
NCBI-ProteinID: XLS22269
LinkDB
Position
2568485..2570047
AA seq 520 aa
MPQVPIWGCVLIVLAVAALCGALAFFAGVNHRKREAEAAIGSAEDEAKRIISNAIKTAAA
KKKEAVLEGKDEIHRLRNESEREMNDRRKEIQRQERRVSQKEESLDKKMENLESKENAVE
NKMRKAEERLKEAESVKKSQIDMLERISSFTVDQAKEYLLKLLEDDLVHEKAIKVMEYEQ
QTKEECDKLAREIISVAIQRCAADHVSEAAISVVPLPNDEMKGRIIGREGRNIRAIEQLT
GVDLIIDDTPEAITLSSFEPVRREVARIALEKLISDGRIHPTRIEETIEKARREVDATIK
AEGERAVLAAGVNGIHHELVKLLGRLRYRTSYGQNVLNHSLEVSYLAGMMASELGLDPTI
ARRAGLLHDIGKALDHEIEGSHVEIGVDVARKYKESEAVIHAIAAHHGDIEAKTVIACLV
QAADAISAARPGARRENIENYIKRLEKLEAVAASFDGVDRCYAIQAGREIRVMVKPEVIN
DEKMTLLARDICKKIEEDLEYPGQIKVNMIRESRAVDFAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgccacaagtaccaatttggggttgtgttctgatcgtactggcagtcgccgctttgtgc
ggcgctctcgctttctttgcgggtgtgaatcatcgaaaaagagaagcggaagctgccatc
ggttcggcagaagacgaagccaagcggatcatcagcaacgcgatcaaaacggctgccgca
aagaaaaaggaagccgtgctcgagggcaaggacgaaattcatcgtctgcgcaacgagtcc
gaacgcgagatgaatgaccgcagaaaagaaattcagcgccaggagcgccgcgtttcccag
aaggaagaatctttggataaaaagatggaaaatctggaatccaaagaaaacgcggtcgaa
aataagatgcgcaaggcggaggaacgcctgaaagaggcagaatccgttaagaaaagtcag
atcgacatgttggagaggatctcttcctttaccgtggaccaggcaaaagagtatttgctc
aagttacttgaggatgatcttgtgcatgaaaaggccattaaagtaatggagtatgaacag
cagacgaaggaagaatgcgacaagctggcaagagagatcatttcggtcgccattcagcgc
tgcgcggcggatcacgtatccgaagccgccatcagcgtcgttccgctgcccaacgatgaa
atgaagggcagaatcatcggccgcgaaggccgtaacatccgcgccattgaacagcttacc
ggcgtggatctcatcatcgatgacacacctgaagccattacgctttcgagctttgagccc
gtaagacgtgaagtggcaagaatcgcccttgaaaagctgatctcggatggcagaatccac
ccgaccagaattgaggagacgattgagaaagcccgccgcgaagtggatgcaaccattaaa
gccgagggcgaacgcgccgtgcttgctgccggcgtaaacggcattcaccatgagcttgtt
aagctgcttggtcggctgcgttaccgcaccagctatggacagaatgtcctcaaccactct
ctggaagtttcttaccttgccggtatgatggcttccgaactgggccttgaccccaccatt
gcaagaagagcaggtttgctgcatgatatcggcaaagcgctcgaccacgagattgaaggc
tcccatgtggagatcggcgtggatgttgcaagaaagtacaaggaaagcgaagccgttatc
cacgcaattgccgcacaccacggcgacattgaagcgaaaacggtcattgcctgcctggtg
caggcagccgacgccatctcggcagcacgccccggcgcgcgccgcgagaacatcgaaaac
tatatcaaacgtctcgaaaagctcgaggccgtggctgcatcgtttgacggtgtggatcgc
tgctacgccattcaggccggccgcgagatccgcgtcatggtaaagcccgaagtgatcaac
gatgagaaaatgacgctgctcgcccgcgacatctgcaagaagattgaggaagacctcgaa
tatccgggtcagattaaggtcaacatgatccgtgaaagcagagcggtcgatttcgcgaaa
taa

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