Hominenteromicrobium mulieris: ACI0CA_12800
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Entry
ACI0CA_12800 CDS
T10961
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hmb Hominenteromicrobium mulieris
Pathway
hmb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACI0CA_12800 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmb03019
]
ACI0CA_12800 (rny)
Messenger RNA biogenesis [BR:
hmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACI0CA_12800 (rny)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_KhpA-B
KH_NusA_2nd
KH_2
KH-I_KHDC4-BBP
Phage_holin_3_6
Motif
Other DBs
NCBI-ProteinID:
XLS22269
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Position
2568485..2570047
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AA seq
520 aa
AA seq
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MPQVPIWGCVLIVLAVAALCGALAFFAGVNHRKREAEAAIGSAEDEAKRIISNAIKTAAA
KKKEAVLEGKDEIHRLRNESEREMNDRRKEIQRQERRVSQKEESLDKKMENLESKENAVE
NKMRKAEERLKEAESVKKSQIDMLERISSFTVDQAKEYLLKLLEDDLVHEKAIKVMEYEQ
QTKEECDKLAREIISVAIQRCAADHVSEAAISVVPLPNDEMKGRIIGREGRNIRAIEQLT
GVDLIIDDTPEAITLSSFEPVRREVARIALEKLISDGRIHPTRIEETIEKARREVDATIK
AEGERAVLAAGVNGIHHELVKLLGRLRYRTSYGQNVLNHSLEVSYLAGMMASELGLDPTI
ARRAGLLHDIGKALDHEIEGSHVEIGVDVARKYKESEAVIHAIAAHHGDIEAKTVIACLV
QAADAISAARPGARRENIENYIKRLEKLEAVAASFDGVDRCYAIQAGREIRVMVKPEVIN
DEKMTLLARDICKKIEEDLEYPGQIKVNMIRESRAVDFAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagtaccaatttggggttgtgttctgatcgtactggcagtcgccgctttgtgc
ggcgctctcgctttctttgcgggtgtgaatcatcgaaaaagagaagcggaagctgccatc
ggttcggcagaagacgaagccaagcggatcatcagcaacgcgatcaaaacggctgccgca
aagaaaaaggaagccgtgctcgagggcaaggacgaaattcatcgtctgcgcaacgagtcc
gaacgcgagatgaatgaccgcagaaaagaaattcagcgccaggagcgccgcgtttcccag
aaggaagaatctttggataaaaagatggaaaatctggaatccaaagaaaacgcggtcgaa
aataagatgcgcaaggcggaggaacgcctgaaagaggcagaatccgttaagaaaagtcag
atcgacatgttggagaggatctcttcctttaccgtggaccaggcaaaagagtatttgctc
aagttacttgaggatgatcttgtgcatgaaaaggccattaaagtaatggagtatgaacag
cagacgaaggaagaatgcgacaagctggcaagagagatcatttcggtcgccattcagcgc
tgcgcggcggatcacgtatccgaagccgccatcagcgtcgttccgctgcccaacgatgaa
atgaagggcagaatcatcggccgcgaaggccgtaacatccgcgccattgaacagcttacc
ggcgtggatctcatcatcgatgacacacctgaagccattacgctttcgagctttgagccc
gtaagacgtgaagtggcaagaatcgcccttgaaaagctgatctcggatggcagaatccac
ccgaccagaattgaggagacgattgagaaagcccgccgcgaagtggatgcaaccattaaa
gccgagggcgaacgcgccgtgcttgctgccggcgtaaacggcattcaccatgagcttgtt
aagctgcttggtcggctgcgttaccgcaccagctatggacagaatgtcctcaaccactct
ctggaagtttcttaccttgccggtatgatggcttccgaactgggccttgaccccaccatt
gcaagaagagcaggtttgctgcatgatatcggcaaagcgctcgaccacgagattgaaggc
tcccatgtggagatcggcgtggatgttgcaagaaagtacaaggaaagcgaagccgttatc
cacgcaattgccgcacaccacggcgacattgaagcgaaaacggtcattgcctgcctggtg
caggcagccgacgccatctcggcagcacgccccggcgcgcgccgcgagaacatcgaaaac
tatatcaaacgtctcgaaaagctcgaggccgtggctgcatcgtttgacggtgtggatcgc
tgctacgccattcaggccggccgcgagatccgcgtcatggtaaagcccgaagtgatcaac
gatgagaaaatgacgctgctcgcccgcgacatctgcaagaagattgaggaagacctcgaa
tatccgggtcagattaaggtcaacatgatccgtgaaagcagagcggtcgatttcgcgaaa
taa
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