Hominenteromicrobium mulieris: ACI0CA_12930
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Entry
ACI0CA_12930 CDS
T10961
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hmb Hominenteromicrobium mulieris
Pathway
hmb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACI0CA_12930 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmb03019
]
ACI0CA_12930 (recQ)
03400 DNA repair and recombination proteins [BR:
hmb03400
]
ACI0CA_12930 (recQ)
Enzymes [BR:
hmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACI0CA_12930 (recQ)
Messenger RNA biogenesis [BR:
hmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACI0CA_12930 (recQ)
DNA repair and recombination proteins [BR:
hmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACI0CA_12930 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XLS22295
LinkDB
All DBs
Position
2595815..2597632
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AA seq
605 aa
AA seq
DB search
METKLDILRRYFGYTSFRLGQEEIVDALLTGRDALCVMPTGAGKSVCYQVPALLLPGITL
VISPLISLMKDQVESLTQAGVHAAYLNSSLTPAQYSRALHNLSEGLYKLVYVAPERLSTE
NFRTAVENLNISLIAVDEAHCVSQWGQDFRPDYLKIAEFAESLKNRPTIGAFTATATKAV
RKDIAEHLHLIDPVRITTGFDRPNLYFGVQMPHSKALALLKLIEERPGKCGIVYCSTRRT
VEEVDALLNDKGIPSTRYHAGLPEEERRRNQDDFVYDRKPIMVATNAFGMGIDKSNVSFV
IHYNMPKNLESYYQEAGRAGRDGSPAECILLYSPQDVRTNRYLIENSDPNPDLDFETQEK
LIQREYDRLRKMTYYCTTADCLRAFILKYFGEPAEEYCGNCSSCAGGSILVEATVEAQQV
LSCVARTGQRLGISMICDILRGSENERVLQMNLQTQSTYGLMREKPIFEIKRIIDALLMQ
ELLIQTDGQYPVLKLTQNARPVLLGEKSFEMRIPVPQEKAKKPDKAAGDADPELFARLKK
LRAALAAKASVPAYVVFTDTTLRDMCAKMPTDEQELLQVSGVGERKAHRYGKAFLEEINR
KAEEE
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaaactcgatattctgcggcgctatttcggttacacgtcctttcgcctcggt
caggaggaaattgtagatgcactgctcacgggccgcgatgcgctgtgcgtcatgccgacg
ggcgcaggcaaatccgtgtgctatcaggtgccggcactcctgctgccgggcatcacgctt
gtcatctccccgctcatttcgctgatgaaagatcaggtagaatcgctgacgcaggcgggc
gtgcacgcggcatacctcaacagctcgctcaccccggcacagtacagccgcgcactacac
aatttatccgagggattgtataagctcgtctacgtcgcgccggagcgcctttcgaccgag
aacttccgcacggccgtagagaacctcaatatttctctcatcgccgtggatgaagcgcac
tgcgtctctcagtgggggcaggacttccgcccggactatttaaagattgcggaatttgcc
gaaagtttgaaaaatcgcccgacgatcggcgcattcaccgccacggcaacaaaagccgtg
cgcaaggacattgcggagcacctgcacctcattgaccccgtgcgtatcacgacgggcttt
gaccgcccgaacttatatttcggcgtgcagatgccgcacagtaaggcgctggcgcttttg
aagctcattgaggaacgcccgggcaaatgcggcattgtgtactgctccacgcgccgcacc
gtggaagaagtggacgcgcttttaaacgacaagggcatcccttccacgcgctaccacgcc
ggtctgccggaggaagaacgcaggcggaatcaggacgatttcgtctatgaccgcaagccc
attatggtcgcgacgaacgcgttcggcatgggcatcgataaatccaacgtgtcgttcgtc
atccactacaacatgccgaaaaacctcgagagctattatcaggaagccgggcgtgccgga
cgcgacggcagtcccgccgagtgtattttgctttacagcccgcaggacgtgcgcacgaac
cgctatttaatcgaaaacagcgacccgaaccccgacctcgactttgaaacgcaggaaaag
ctcatccagcgcgaatacgaccgtctgcgaaaaatgacatattactgcacgacggctgat
tgcctgcgcgcattcatcttaaaatacttcggcgagcccgccgaggaatactgcggcaat
tgctccagctgcgcgggcggctccattttggtagaggccaccgtggaagcacagcaggtg
ctctcctgcgtggcgcgcaccgggcagcggctcggcatcagcatgatctgcgacattctg
cgcggcagcgaaaatgagcgtgttttgcaaatgaatctgcaaacacagtccacctacggg
ctcatgcgcgaaaagccgatttttgaaattaagcgtatcatcgacgcacttttgatgcag
gaattgctcatccagaccgacgggcaatatccggttttaaagctgacgcagaacgcgcgg
ccggttttgcttggggaaaaaagctttgaaatgcgtattcccgtgccgcaggaaaaagcg
aagaagccggacaaggccgcaggcgatgccgacccggagcttttcgcacggctgaaaaag
ctgcgtgccgcgcttgccgcaaaagcgagcgtgccggcctacgtcgttttcaccgacacc
actttgcgcgatatgtgcgccaaaatgccgacggacgaacaggagcttttgcaggtctcc
ggtgtgggcgagcgcaaggcgcatcgctacggcaaggcctttttggaagagatcaaccgc
aaagcggaggaagaataa
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