Hyphomicrobium sp. MC1: HYPMC_0009
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Entry
HYPMC_0009 CDS
T01557
Symbol
pbpC
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00550
Peptidoglycan biosynthesis
hmc01100
Metabolic pathways
hmc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HYPMC_0009 (pbpC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HYPMC_0009 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hmc01003
]
HYPMC_0009 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
HYPMC_0009 (pbpC)
Enzymes [BR:
hmc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
HYPMC_0009 (pbpC)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HYPMC_0009 (pbpC)
Glycosyltransferases [BR:
hmc01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
HYPMC_0009 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
HYPMC_0009 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
CCB63252
UniProt:
F8J4T1
LinkDB
All DBs
Position
9703..12027
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AA seq
774 aa
AA seq
DB search
MLRAIAAALGFVLWLVRRILFGPRRKPAAAPEPTLPASFQSVATRAFGAGGADKPVQAVQ
AASRPKQKRAPRLTLKYRVAIGGAVLGTGLLMLTFAFMMVYYTVVFPDPLALRASGHAPL
IRILARDGTVLAVRGAPHEYIPLEKMAKALPAAVVATEDRRFFDHYGVDPAGMLRAMFAN
LRAGRFAQGGSTLTQQLAKNLFLTQDRTLSRKIAELGLALWLEVRLTKPEILELYLNQVY
FGSGAYGVEAASERYLNKPASELTIPEAAMIAGLLKAPSKYSPSASPGAARARARVVITK
MFDAGFISEAQETQALAQTLVFNEQKIEQTAADAGYVVDWVLDQLPAAVSEDEQADLIVE
TTVDKNLQRRAQETVADTLARKGEAYGASQAAMTLLDGSGGVRVMVGGRDYAGSQFNRVI
RGKRQPGSAFKPFIYLAALNKGMSPDTIVNDAPITIGGWSPKNDDGKYAGPVPIRRAIAQ
SINTVAVRLNQAIGRGTAVDLAQRLGIKSELHDGPSLALGTSEVTLLEMAGAYAAFSNGG
YVVTPHVITRITTSRGRVLYEYEPPQNARIPEADRIGALNDILNAAVDYGTGRRAALPDR
PAAGKTGTTQDFRDAWFMGYTAQFAAGVWVGNDNGKSMNRATGGSLPAEIWRQVMRVADE
GLPPLLLPGTVVANPQVEAATWGGLANRLPRVVEAPEILPWQRRPGALVQQPYSATSVSL
AAPNASHPANSIGEDFIEKALASSPANGSSHAAQVAAPDSSTPQSGAFPFSNWW
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
gtgttgcgtgccatcgcagcagctctgggttttgtgttgtggctggtccgcaggattctg
ttcggaccgcggcgcaagccagctgcggcgcccgagccgacgcttccggcgtcgtttcag
tccgttgcgacgcgggcgttcggtgcgggtggggccgacaagcctgttcaggctgtgcaa
gcggcttcgcgaccgaaacagaaacgcgcgcctcggctgacgctgaaatatcgcgtcgca
atcggcggtgcggttctgggcaccggtctgttgatgctgaccttcgcattcatgatggtc
tattacaccgttgtttttccggacccgctggcgctgcgtgcctccggccatgcaccgctc
atccggatcctggcgcgcgacggaacggtgctcgccgtgcgtggtgcgccgcatgaatac
atcccgctcgaaaaaatggccaaagcgttgcctgcggcagtcgttgcaacagaagaccgg
cgctttttcgatcattacggtgtcgatccggctggcatgctgcgggcgatgtttgcgaac
ttgcgcgccgggcggttcgcgcaaggcggttcgacgctgacgcagcagctcgcgaagaat
ttgtttctgacgcaagaccgaacgctgtcacgcaagatcgccgagcttgggctggcgctg
tggctcgaggttcgtttgacgaagccggagattttggaactctacttgaaccaagtctat
ttcggtagcggcgcatatggcgtggaggcggcaagcgagcggtatctcaataaacctgcg
agcgaactgacgatcccggaagcggcgatgattgccgggcttctgaaggcgccttcgaaa
tattcgccgtcggcgagccctggcgctgcccgcgcgcgggcgcgcgttgtcattaccaag
atgtttgatgccggcttcatctccgaagcgcaggagacgcaggcgctggcgcagacgctg
gtgttcaacgaacagaagatcgagcagacggcggcagacgcgggctatgtcgtcgattgg
gttctcgatcagttgccggctgcggtcagcgaggacgaacaggccgatctcatcgtcgag
acgaccgttgataaaaatcttcagcggcgcgcgcaagagaccgtcgcggatacgctggca
cggaaaggcgaggcctacggtgcgagccaagcggcgatgacgctgctcgacggcagcggc
ggtgtgcgtgtgatggtcggtggccgtgattatgccggcagccagttcaatcgcgtcatc
aggggcaagcgacagccggggtcggcgttcaagccgttcatctatctcgccgcgttgaac
aagggcatgtcgcccgacacgatcgtcaatgatgcgccgatcacgatcggcgggtggtcg
ccgaagaacgacgacgggaagtacgcagggccggttccgatccggcgcgcgattgcgcag
tcgatcaacaccgttgcggtgcgcctcaatcaggcgatcgggcgcggcacggccgtcgat
ctggcgcagcggctcggcatcaagtccgagctgcatgatggtccgtcgctcgcgctcggg
acgtcggaagtgacgctgcttgaaatggcgggtgcttatgcggcgttctcgaatggcgga
tacgtggtcacgccgcacgtcatcacgcggatcacgacgagccgcggccgtgtgctctac
gaatacgagccgccgcagaacgcgcgcatcccagaggcggaccgcatcggcgcgctgaac
gacatcctgaatgcggccgtcgattacggcaccggacggcgcgccgcacttcccgatcgg
cctgcggcgggcaagaccggcacgacgcaggatttccgcgatgcctggttcatgggatac
acggcacagtttgcggcaggcgtctgggttggcaatgataacggcaagtcgatgaaccgc
gcgacgggcggcagtctgcccgccgagatctggcggcaggtgatgcgcgttgccgacgaa
ggcttgccgccgctgttgttgccgggaaccgttgtcgcgaacccccaggtcgaagcggcg
acatggggcggccttgcgaaccggctgccgcgtgtggtcgaagcgccagaaattctgcca
tggcagcgtcgtccgggcgctttggtacagcagccctattcggcgacttcggtgtcgctc
gccgcgccgaatgcatcgcatccggccaacagcatcggcgaagacttcatcgagaaagct
ctggcgtcatcgccggcgaatggcagcagtcatgccgcgcaagtcgctgcgccggactca
tcgacgccgcaaagcggcgcctttccattcagcaattggtggtga
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