Hyphomicrobium sp. MC1: HYPMC_0038
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Entry
HYPMC_0038 CDS
T01557
Name
(GenBank) Histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmc03032
]
HYPMC_0038
03036 Chromosome and associated proteins [BR:
hmc03036
]
HYPMC_0038
03400 DNA repair and recombination proteins [BR:
hmc03400
]
HYPMC_0038
DNA replication proteins [BR:
hmc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HYPMC_0038
Chromosome and associated proteins [BR:
hmc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HYPMC_0038
DNA repair and recombination proteins [BR:
hmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HYPMC_0038
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
CCB63279
UniProt:
F8J4V8
LinkDB
All DBs
Position
32731..33069
Genome browser
AA seq
112 aa
AA seq
DB search
MAKAAAPAKKAPAKAPAKAKIDTVTLKHMAATLAETHEIPKKQSVALLEDLVAQIAKNLK
KGARIRIGGLGVLQVRKRPARMGRNPATGEAIKIKASKKIAFRAAKELKESI
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggcagcagcgccagcaaagaaagcaccagccaaagcgccagctaaggctaag
atcgataccgtcacgttgaagcacatggccgcgacgctcgcggaaacgcatgagattccg
aagaagcagtcggttgcactgctcgaagatctcgttgctcagatcgcgaagaacctcaag
aagggcgcgcgcatccgtatcggtggcctcggcgttcttcaggtccgcaagcgcccggca
cgcatgggccgcaacccggcaacgggcgaagccatcaagatcaaggcttcgaagaagatc
gctttccgcgccgcgaaagagctgaaagagtcgatctaa
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