Hyphomicrobium sp. MC1: HYPMC_0053
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Entry
HYPMC_0053 CDS
T01557
Name
(GenBank) Transcriptional regulator, LysR family
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hmc03000
]
HYPMC_0053
Transcription factors [BR:
hmc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HYPMC_0053
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_11
HTH_20
Motif
Other DBs
NCBI-ProteinID:
CCB63294
UniProt:
F8J4X3
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Position
46102..47082
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AA seq
326 aa
AA seq
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MARRLPPLNALKAFEAAARLSSFSRAADELNVTHAAISRHVRALEAEFRTPLFERTGRGV
ELTEVGRSLALELTKGFDLLASAVSQFARPSRRRKRLMVTSDPAFAALWLVPRLGAFTAQ
NPNIDIVLDATPRLVNFSKEDVDLGIRWGGGAWEGLESKSLALSELTLVCSPQFLRDNPL
FVASDLDGSLLIQETAKECWDAWLSAAGVADEVTPSGPTLNGDLVIAAAEAGQGLALADQ
IQAGDALIAGRLVRPLDIRATRFGYYLVRRSGAKISDAAMAFETWLAAELKTFQAALKSM
QTVTSIKSRKTGKAKAAPRSRSVRVS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcccgacgattgccgccgctcaatgcactgaaagcgttcgaggccgccgcgcggctg
tcgagcttttcgcgtgcggccgatgaactcaatgttacgcatgctgccataagccggcat
gtgcgcgcgctcgaggccgagttccgcacgccactgttcgaacgcacgggacgcggcgtg
gagctgacggaagtcggccggtcgctggcgctcgaacttacaaaagggttcgatcttctt
gcttcggcggttagtcagttcgcgcggccgtcgcggcggcgcaagcgtttgatggtcaca
tcagatccggctttcgccgcgctctggttggtgccgcggctcggcgcctttacggcgcag
aacccgaatatcgacatcgttcttgatgcaacgccccgtctcgtcaatttctccaaagag
gacgtcgacctcggtatccgctggggcggcggtgcctgggaaggactggaaagcaagtca
ctcgcgctctcggaactgacgctggtctgcagtcctcaattcttgcgcgacaatccattg
tttgttgcctccgatctggacggcagtcttctcattcaggagacggcgaaggaatgctgg
gacgcgtggctttcggcggcaggcgtcgcggacgaggtaacgccgtccgggccgacactt
aatggcgacctcgtcattgctgcagccgaagccggacagggtttggcgctcgccgatcaa
atccaggcgggtgatgcgctcatcgccggccggcttgttcggccgctcgatatcagggcg
acgcggttcggctattatctcgtgcgccgatccggtgcgaagatttcggatgcggcgatg
gcattcgaaacttggctcgccgccgaactcaagacgttccaggcggctctcaaatcaatg
cagacagtaacttcaatcaaaagccgtaagaccgggaaagccaaagctgctccccggtcc
cgcagcgtccgcgtgtcttag
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