Hyphomicrobium sp. MC1: HYPMC_0334
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Entry
HYPMC_0334 CDS
T01557
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00470
D-Amino acid metabolism
hmc00550
Peptidoglycan biosynthesis
hmc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HYPMC_0334 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HYPMC_0334 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
HYPMC_0334 (murD)
Enzymes [BR:
hmc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HYPMC_0334 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
Precursor biosynthesis
Amino acid ligase
HYPMC_0334 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
CCB63568
UniProt:
F8J8J4
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All DBs
Position
324386..325801
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AA seq
471 aa
AA seq
DB search
MIRATSFKGKSVAVFGLGASGIAAAEALIAGGAIVSAWDDGIAARDAAIARDIPLFDLSV
VDWSGFSALVLAPGVPLTHPEPHWTVKRATEHGVAVIGDIEIFARERALHAPGSPFIGIT
GTNGKSTTTALISHILRHAGLDVQMGGNIGRPILTLEPPEPGRFHVVELSSFQIDLTPTL
GPTVGVMLNVTPDHLDRHGSIEHYAEIKERLVLGADIAAVGIDDDFGLAMLRRRINVGPV
VAFSAEKSIAPGYSLLGDTIVCSNREGLAVKLGSLTGVPTLRGKHNGQNALAAVAAVREC
LSALGRTTDLDWQGALSSFPGLPHRMEEIGRIGKVLFINDSKATNADSTEKALQSFPRDV
YWIAGGKPKAGGIESLEPHFGGITKAYLIGEATDAFAATLDGKVPFERSGTLNEALWAAS
ADAQLSDGQEPVVLLSPACASYDQFRNFEVRGDCFRGLVAALPGIELRAGP
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcgcgacgtcctttaaaggaaaatccgtagcggtgtttgggcttggtgcgtcc
ggcattgcggctgccgaggctttgattgccggcggcgccatcgtctccgcttgggatgac
ggcatcgcggcgcgggatgcagccatcgccagggatattccgctttttgatctgtccgtt
gtggattggtcgggcttctccgcgctggtgctggcgccaggcgtgccgctgacccatccg
gagccgcattggacggtgaagcgcgcgaccgagcacggtgttgcggtcatcggcgatatc
gagattttcgcgcgcgagcgggcgctgcatgcgcccggctcgccgttcattgggatcacc
ggcaccaatggcaaatcgacgacgacggcgctgatctcgcacattctgcggcacgcgggg
ctcgacgtgcagatgggcggcaatatcggccggccgatcctgacgcttgagccgccggag
cccggacggtttcatgtcgtcgagctgtcgtcgttccagatcgacctgacgccgacgctc
gggccgaccgtcggcgtgatgctgaacgtcacgcctgatcatctcgaccgccatggctcg
atcgagcattacgccgagatcaaggagcgcctcgtgctcggcgcggacattgcggcggtt
ggcatcgatgacgacttcggcctggcgatgctgcgcaggcggatcaacgtcggtcctgtt
gtggccttcagcgcggaaaaatccatcgcaccgggttacagcctgctcggcgatacgatc
gtatgcagcaatcgcgagggcctcgcggtgaagctgggctcgctgacgggcgttccgacg
ctgcgcggcaagcacaacgggcagaatgcattggccgctgttgcggcggttcgcgagtgt
ctcagcgcgctcgggcggacgaccgatctcgattggcagggtgcgctgtcgtcgttcccc
ggtctgccgcaccggatggaagagatcggccgcatcggcaaggtgctattcatcaacgat
agcaaagcgacgaatgcggattcgacggagaaagcgctgcagtcgtttccgcgcgatgtc
tattggatcgcaggcggtaagccgaaggccggcggcatcgagagcctggagccgcatttc
ggcggtatcacgaaagcatatttgatcggcgaggccacggatgccttcgcagcgacgctc
gacggcaaagttccgttcgagcgcagcggcacgctgaacgaggcgctgtgggccgcttcg
gctgacgctcagttgagcgatggacaggaacccgtcgtgctgctttcgcctgcgtgcgcg
agttacgatcagttccgtaatttcgaggtgcgcggcgattgtttccgagggctggtcgca
gctcttcccggtatcgaattgcgggctgggccatga
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