Hyphomicrobium sp. MC1: HYPMC_0410
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Entry
HYPMC_0410 CDS
T01557
Symbol
potD
Name
(GenBank) Polyamine ABC transporter, periplasmic polyamine-binding protein PotD-4
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HYPMC_0410 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hmc02000
]
HYPMC_0410 (potD)
Transporters [BR:
hmc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
HYPMC_0410 (potD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
CCB63644
LinkDB
All DBs
Position
403868..404977
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AA seq
369 aa
AA seq
DB search
MPEGRRVSQRKNYSGNRGGLVRRLSRTLGAVTALSLFGASVASADSLNMLVWEGYADASF
VEPFKKESGCAVSAVYVGTNDEIFAKLMAGGGTYDLVTPSNDTTMKLIDAGLVDPIDPDK
ISAEADFFPMLKSPPWLSKDGKTYGVPYAWGIIRILVDATAVPEPPTSLAFLWDPKYAGK
FAMWDDIETLYEAARYLGIKNVYDMNDEELAKVKEALLKLKPNVRKYWTTAGEMTTLLQG
KEVIGGNAWEETLVKLRGGDRKLIDIVPKEGRGGWSDSWMIAKGASSNSCVYKWLNYVSS
AKAQALGHAVTGFGYSNAKMVDFLPDDQKKSFEELGMTNPETLKTVSWWQPVKQRAKYLE
IWNQVKAAQ
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaggtcgtcgcgtgtcgcaacgtaaaaattattcgggaaatcgcggtggcttg
gttcgacgcctgtcgcgaacgctcggagcagtcacggcgctgtcactctttggcgcctct
gtcgcgtctgccgatagcttaaacatgctggtttgggagggctatgccgacgcgagtttc
gtcgagcctttcaaaaaggaaagcggttgcgccgtctcggctgtctatgtcggaacgaac
gacgaaattttcgccaagctgatggccggcggcggcacttacgatctcgtgacgccctcc
aacgacacgaccatgaagctgattgatgctggattggttgatccgatcgatcctgacaag
atctcggcggaggccgatttcttcccgatgctgaaatcgccgccgtggctgtcgaaagat
ggcaagacgtacggcgttccctatgcctggggcatcattcgcatcctcgtcgacgccact
gccgtgccggagccgccgacgagtctcgcgtttctctgggaccccaagtacgccggtaag
ttcgcgatgtgggacgatatcgagacactctatgaagcggcgcgctatctcggaatcaag
aacgtctacgacatgaatgacgaggagcttgcgaaggtcaaagaagcgcttctgaagctc
aagccgaacgttcgcaagtactggacgacagcaggcgagatgacgaccttgctccaaggc
aaggaagtcatcggcggcaatgcatgggaagaaacgttggtcaagctgcgcggcggtgat
cggaaactcatcgacatcgttccaaaggagggacggggtggctggagcgatagctggatg
attgccaagggagcttcgtccaattcctgcgtctacaaatggctgaattacgtgtcgagt
gcaaaggcacaagctctcggacacgccgttacgggatttggatattccaacgccaagatg
gtcgatttccttccggacgaccagaagaagtcgtttgaagaactcggcatgacgaacccg
gaaacgctgaagaccgtcagctggtggcagccggtgaaacagcgcgcgaaatatctggaa
atctggaatcaggtcaaagccgcgcaataa
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