Hyphomicrobium sp. MC1: HYPMC_0460
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Entry
HYPMC_0460 CDS
T01557
Name
(GenBank) putative 3-methyladenine DNA glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HYPMC_0460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmc03400
]
HYPMC_0460
Enzymes [BR:
hmc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HYPMC_0460
DNA repair and recombination proteins [BR:
hmc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HYPMC_0460
Prokaryotic type
HYPMC_0460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
CCB63694
LinkDB
All DBs
Position
complement(451369..451953)
Genome browser
AA seq
194 aa
AA seq
DB search
MCERLSGVRIVNRGGQILDSVVGSNVLPQSFFDRPAAKVARDLLGKNLVRRIGKMRTALA
VTETEAYEGVHDLASHSSKGRTARTEVMFGPPAHFYIYRTYGIHWMLNIVTGKAGDASAV
LIRGVEGVSGPGRVTAAMDIDASFHGREATPKTGLWFADTGENATKLRVRSTPRIGVDYT
GPVWAAKKLRFVRI
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagcgactaagcggagttcggatcgtcaatcgtggggggcagatattggactcc
gttgtcggcagcaatgtacttccgcagtcgttctttgaccgcccggccgcaaaggttgct
cgcgatctcctcggaaaaaacctcgtgcgtcggatcgggaaaatgcgaaccgcgttggcc
gtgaccgaaaccgaggcctacgaaggagtccacgaccttgcctcgcattcttccaaagga
agaacggcgagaactgaagtcatgttcggaccgccggcacacttttatatctaccgcacc
tacggcatccattggatgctcaacatcgtgacgggcaaggcgggtgacgcatccgccgtg
ctcatccgaggcgtcgaaggagtaagcgggcccggccgcgtcaccgcagcgatggacatc
gacgcgagcttccacggccgggaagccacacccaaaaccggactttggtttgccgatacg
ggcgagaacgcaacgaagcttcgcgttcgctcaacgccgcgcatcggcgttgattacaca
ggcccggtatgggccgccaaaaaactacgcttcgtcagaatttga
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