Hyphomicrobium sp. MC1: HYPMC_0625
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Entry
HYPMC_0625 CDS
T01557
Symbol
yejF
Name
(GenBank) oligopeptide transport protein (ABC superfamily, atp_bind)
KO
K13896
microcin C transport system ATP-binding protein
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HYPMC_0625 (yejF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hmc02000
]
HYPMC_0625 (yejF)
Transporters [BR:
hmc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
HYPMC_0625 (yejF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
oligo_HPY
AAA_21
AAA_22
AAA_16
GvpD_P-loop
AAA_25
AAA_29
nSTAND3
NACHT
SLFN-g3_helicase
AAA_7
ATP-synt_ab
DO-GTPase2
MobB
Pox_A32
Mg_chelatase
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
CCB63859
UniProt:
F8JBH0
LinkDB
All DBs
Position
complement(614712..616343)
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AA seq
543 aa
AA seq
DB search
MANPVPLVDVRNLSVAFGEGKDLVQVVNGVSFHINKGETVALVGESGSGKTVSAMSILRL
LPNSASHPTGEILFGGTDILKMSGNDLREIRGRRISIIFQEPMTSLNPLHTIEKQVGEII
KLHQMLPEAKTRERVIELLTKVGIRDPEKRLGAYPHELSGGQRQRVMIAIALANKPDLLI
ADEPTTALDVTIQAQILELLKSLQKEMGMAMLLITHDLGIVRRMAERVYVMRNGDIVETG
DAEQIFTAPKHAYTRHLLDAEPKGMPPAADPTRPVVVETDDLKVWFPIKKGLLQRTVDYV
KAVDGLSMKLRAGETLGVVGESGSGKTTLGLAILRLISSQGPIAYVGKRIDALTNKQMRP
LRKEMQIVFQDPYGSLSPRLTVGQIIEEGLLIQNPELDEEQRRERVGAELKEVGLDPASQ
DRYPHEFSGGQRQRIAIARAMVLQPKFVMLDEPTSALDMSVQAQIVDLLRKLQANHGLAY
LFISHDLKVVRALCNYVIVMKNGKVVEEGPARDIFEKPQDEYTKALLAAAFDIKVAYKGA
LAS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcccgttcctctcgttgacgtgcgcaatctctccgtcgcttttggcgaagga
aaagacctcgtgcaggtcgtcaacggcgtctcgttccacatcaacaagggcgaaaccgtc
gcgctcgtcggcgagtccggctccggcaagaccgtctccgcaatgtcgatcttgcgcctg
ttgccgaactccgcctcgcatccgaccggcgagattttgttcggcggcaccgacatcctg
aaaatgtctggcaatgaccttcgcgaaatccgcggccgccgcatctcgatcattttccaa
gagccgatgacatcgctcaacccgcttcacaccatcgagaagcaggtcggcgaaatcatc
aagctgcaccaaatgctgcccgaagccaaaacgcgcgagcgcgtcatcgagcttctgacg
aaggttggcatccgcgatccggagaagcgcctcggcgcctatccgcatgagctctctggt
ggccagcgccagcgcgtgatgatcgctattgcgctcgctaacaaacctgacctattgatc
gccgacgagccgactaccgcactcgacgtcaccattcaggcgcaaattctggagcttctg
aagtcgcttcagaaagagatgggcatggccatgctgctcatcacccacgatctcggcatc
gtgcgccgcatggccgaacgcgtctacgtcatgcgcaacggcgacatcgtcgagaccggc
gacgccgaacagatcttcaccgcacccaagcacgcctacacgcgccatcttctcgatgcc
gagccgaaaggcatgccgcccgccgccgacccgacgcgtcccgtcgtcgtcgagacggac
gatctgaaagtctggttcccgatcaagaagggcctgttgcagcgaaccgtcgattacgta
aaagcggtcgacggtctgtcgatgaaacttcgcgccggcgagacgctcggcgtcgtcggt
gaatccggctccggcaaaaccaccctcggccttgctatcctgcggctcatttcatcgcaa
ggtcccatcgcctacgtcggcaaacgcatcgacgcgctgacgaacaagcagatgcgcccg
ctgcgcaaggaaatgcagatcgtcttccaggacccttacggctcgctctcgccacggttg
acggtcggccagatcatcgaggaagggcttctgatccagaatcccgaactcgacgaagag
cagcggcgcgaacgcgtcggcgcggaactgaaggaagtcggactcgatccagcgtcgcag
gatcgctatccgcatgagttctccggcggccagcgccagcgcatcgcgattgcccgcgcc
atggtcttgcagccgaagttcgtcatgctcgacgagccgacaagcgctctcgacatgagc
gttcaggcccagatcgtcgatcttctgcgcaagctgcaagcgaaccacggtctcgcctat
ctcttcatcagccacgacctcaaagtcgtgcgcgcgctttgcaactacgtcattgtcatg
aagaacggcaaagtcgtcgaagaaggccccgcgcgcgatatcttcgaaaagccgcaagac
gaatataccaaggcgctgctcgcggcagccttcgacatcaaggtggcatacaagggggcg
cttgcgagctga
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