Hyphomicrobium sp. MC1: HYPMC_0633
Help
Entry
HYPMC_0633 CDS
T01557
Symbol
dnaX
Name
(GenBank) DNA polymerase III, tau and gamma subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc03030
DNA replication
hmc03430
Mismatch repair
hmc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYPMC_0633 (dnaX)
03430 Mismatch repair
HYPMC_0633 (dnaX)
03440 Homologous recombination
HYPMC_0633 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmc03032
]
HYPMC_0633 (dnaX)
03400 DNA repair and recombination proteins [BR:
hmc03400
]
HYPMC_0633 (dnaX)
Enzymes [BR:
hmc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYPMC_0633 (dnaX)
DNA replication proteins [BR:
hmc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYPMC_0633 (dnaX)
DNA repair and recombination proteins [BR:
hmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYPMC_0633 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_30
AAA_16
AAA_18
AAA_14
Sigma54_activ_2
DUF815
DNA_pol3_delta_C
AAA_assoc_2
AAA_19
TIP49
SRP54
PIF1
AAA_2
nSTAND3
SKI
CbiA
TsaE
Motif
Other DBs
NCBI-ProteinID:
CCB63867
LinkDB
All DBs
Position
625681..627519
Genome browser
AA seq
612 aa
AA seq
DB search
MAKKKSETSDGVEGSGSTEPAKPYVVLARKYRPATFDDLIGQSAMVTTLRNAFASGRIAQ
GYMLTGVRGVGKTTTARILARALNYEAPGYDKPTIDMPGLGVHCKDIMEGRHPDVLEMDA
ASNTGVDNIREIIESAQYTPLVARTKVFLIDEVHMLSKGAFNALLKTLEEPPSHVRFIFA
TTEIRKVPVTVLSRCQRFDLRRVEQPVLAEHFQKIVGLESAEADADALQLIARAAEGSVR
DGLSILDQAIAMGEGHVTAAKVRDMLGLADRARIFDLAEALFKGDVATAIRGLESLHRDG
AEAAEVVSDLAEAVHAIARVKAVGEEPAGEALTAEEKARIAGLASRLSMPYLSRAWQMLV
KGFDEVSRAPNPRVAAEMILIRLAYTSDLPTPDELIKALGGGSVPARRPALPAGDAPAGQ
RGPLNARVDVPVAENDQDDLGDLGDLGDGFEFDDGEPIGDAEGDEVAAPAVAAGSMKSDP
RSFADVVALAGEKRDAKLKWHLEDHVSLVKFDAVAGSIDLFLMPEAPPELANDLREKLNL
WTTRRWVVVLSKDAGAPPIGVVRREREAQELESLKAHPAVRAVLEAFPDAKIAEVRRIAG
HETDTDSESEAV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaagaaatcggaaacgtctgacggcgtcgaaggttcgggaagcaccgagccc
gcgaagccgtatgtcgtgctggcgcggaagtatcgcccggcgacgttcgatgacctgatc
ggccagtcggcgatggtgacgacgctgcgcaacgcgttcgcgtccgggcgcatcgcgcag
ggctacatgctgacgggcgtgcgcggtgtcggcaagacgacgacggcgcgcattctcgcg
cgggcgctcaactacgaagcgccgggctacgacaagccgaccatcgacatgccgggtctc
ggcgttcactgcaaggacatcatggagggccgtcatccggacgtgctcgaaatggacgct
gcctcgaataccggtgtcgataatatccgcgagatcatagaaagcgcgcagtacacgcca
ctcgtcgcgcgcacgaaagtattcctgatcgacgaggttcacatgctgtcgaagggcgcg
ttcaacgcgctcttgaagacgcttgaagaaccgccatcgcatgtccgtttcattttcgcg
acgaccgaaattcgcaaagttcccgtcaccgtgctgtcgcgctgtcagcgcttcgacttg
cgccgtgtcgagcaaccggtgctggctgaacattttcagaagatcgtcggcctggaaagt
gccgaagctgacgctgatgctttgcagcttatcgcacgcgcggccgaaggttcggtgcgc
gacggcctttccattctcgatcaggcgatcgcgatgggcgaggggcacgttacggcggcg
aaggttcgcgacatgctcggccttgccgatcgcgcgcggattttcgatctcgctgaagcg
ctcttcaaaggcgatgtcgcgacggccattcgaggattggaatcgctgcatcgtgatggc
gcggaagcggccgaggtcgtgtccgatctggctgaagccgtacacgccatagcgcgcgtt
aaagctgtcggcgaagagcctgcgggcgaagctctgacggcggaagaaaaggcgcgcatc
gccggtctcgcatcgcgtttgtcgatgccgtacctgtcgcgagcgtggcagatgctggtc
aaaggtttcgatgaggtttcgcgcgcgcccaatccgcgtgtcgcggccgagatgattttg
attcggcttgcttacacgtcggatctgccgacgcccgacgagttgatcaaagcgctcggc
ggcgggtctgttccggcgcggcgtccggcattgccggccggggatgctcctgccggtcag
cgcggtccgctcaatgcgcgtgttgatgttccggtcgctgaaaacgatcaggatgatctc
ggcgacctcggtgatctgggcgacggcttcgaattcgacgacggcgagccgattggcgat
gccgagggtgacgaagtggctgctccggctgtcgcggccggatcgatgaagtccgatccg
agatcgtttgcagacgtcgtggcgctcgcaggcgaaaagcgcgatgcgaagctcaagtgg
cacctcgaagaccatgtcagcctcgtcaagttcgatgcggtggcgggttcgatcgatctt
tttctgatgcccgaggcgccgccggaactcgccaacgaccttcgggaaaaactcaacctt
tggacaacgcggcgctgggtcgtcgtgctttcgaaggatgccggcgcgcctcctattggc
gtcgtgcgcagagagcgcgaagctcaggaactcgaatcgctcaaagcgcatccggcagtg
cgcgcggttctcgaagcttttcccgatgcgaagatcgccgaagtgcggcgaattgcaggg
catgagacagatacggacagcgagagcgaagccgtttaa
DBGET
integrated database retrieval system
