Hyphomicrobium sp. MC1: HYPMC_0950
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Entry
HYPMC_0950 CDS
T01557
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
HYPMC_0950 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmc03016
]
HYPMC_0950 (trmU)
Enzymes [BR:
hmc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
HYPMC_0950 (trmU)
Transfer RNA biogenesis [BR:
hmc03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
HYPMC_0950 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
NAD_synthase
QueC
Arginosuc_synth
DUF7411
ThiI
ATP_bind_3
Glyco_hydro_7
PGM1_C
Motif
Other DBs
NCBI-ProteinID:
CCB64183
UniProt:
F8JF16
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All DBs
Position
complement(916268..917494)
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AA seq
408 aa
AA seq
DB search
MTQSETTFASRGTMTNPANAPIAAPAARKRVVVAMSGGVDSSVAAAIMKAAGHDVIGVTL
QLYDHGSATGRKGSCCAGQDIHDARRVAEALDIPHYVLDYETRFAAKVIETFAESYVAGE
TPIPCVTCNNEIKFRDLLDTAKDLGADVLVTGHYVQRLDTEHGPVLARAVDTDRDQSYFL
FGITKEQLASLWFPIGGMRKDDVRKLARSFNLPVADKSDSQDICFVPTGKYTDVIERLKP
TALDSGNIVHLDGRILGRHDGIVHYTVGQRRGIKIPAAEPLYVVRLDAARNEVIVGPRSA
LTTTGLMLRNVNWLGEKPLEDVGASGLSLYVRMRSSQKLRLALLQIEQNGAVRIELHDGE
EGIATGQACVFYADDGTEGRVLGGGWIAKTIKANGVEPRVTTMAELGR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgactcagtctgaaacgacatttgccagccgcggcacgatgaccaatcccgccaacgcg
cccatcgcggcgccggccgctcgcaagcgcgtggtcgtcgccatgtccggcggcgtcgac
agctcagttgctgcggcaatcatgaaggcagccggccacgacgtcatcggcgtcacactc
cagctttacgatcatgggtcagccaccggacgcaagggcagctgttgcgccggccaggat
atccacgatgctcggcgcgtcgccgaagctctcgacatcccccattacgttctggactac
gagacgcgcttcgccgccaaggtgatcgagacgttcgccgagagctacgtcgccggcgaa
acgccgattccgtgcgtcacctgcaacaacgagatcaagttccgcgatcttctcgacacc
gccaaggacctcggcgccgacgtactcgtcacgggccattacgtgcagcggctcgacacc
gagcacggccccgtcctcgcccgcgccgtcgatacagatcgcgaccagagctattttctg
ttcgggatcacaaaggagcagctcgcgtccctgtggttcccgatcggcggcatgcgcaag
gacgatgtgcgcaagcttgcccgctcgttcaatctgcccgtcgctgataagtccgacagc
caggacatctgcttcgtcccgaccggcaagtacaccgacgtgatcgaacgcctgaagccg
accgcgctcgattccggcaacatcgtccacctcgacggtcgcattctcggccgtcacgat
ggcatcgttcactacacggtcggtcagcgtcgcggcatcaagatccccgccgccgagccg
ctgtacgtcgtgcgcctcgacgccgcccgcaacgaagtcatcgtcgggccgcgctcggcg
ctgacgacgaccggcctgatgctgcgcaacgtcaattggctcggggaaaagccgctcgaa
gacgtcggcgcctcgggactttcgctgtatgttcgcatgcgttcgtcgcagaagcttcgg
ctcgcactgctgcaaatcgaacaaaatggtgcggtcagaattgaacttcatgacggtgag
gaaggtattgcgaccggtcaggcgtgcgtgttttatgccgatgacgggacggaaggacgc
gttctcggcgggggctggattgccaagacgatcaaggcaaacggtgtcgagcctcgcgtt
acgacgatggccgagttgggacgctag
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