Hyphomicrobium sp. MC1: HYPMC_0993
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Entry
HYPMC_0993 CDS
T01557
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hmc01002
]
HYPMC_0993
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
HYPMC_0993
Peptidases and inhibitors [BR:
hmc01002
]
Cysteine peptidases
Family C82
HYPMC_0993
Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HYPMC_0993
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
CCB64226
UniProt:
F8JFR0
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Position
959116..961539
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AA seq
807 aa
AA seq
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MLRLSPIGAKRGMIKQVTLRLVGVSLLGVCWIGCAPVMAAETTTQDSSSGTTTYFPPKPT
SAADAPVVTPAAPTTTAAIPKSADPPKSNLPAEPAVSPKSSVHDADPSVTATVTPAAGET
PQSQPAPATGDAKPADAKPADVKPDAAPAPATTDTAIVTPSADDKSAADKPAADTPAATP
APSTDSKPDAATATPPAASPASDTAQQPKPAETTPVATPPAPPPVNPVVLAARGKLSDKS
FASNSANDDVTAARDYYSGHTEPLWVHGGEFTRKAKEIISTLKGADDWGLDSSAFAIPAL
GSGSASEGAAEAQLTLSALKYARYARGGRLDPVSLSNILDMKPPVKEPKAVMRELASASD
PGAYLRGLNPKHIGFERLRQALLKARGGATDVADEPVDPALLIKLPTKGKTLKRGVKDDQ
VSLLRQRLKVPADNPSNDRVYDDQLADAVRAFQQANGLKANGVVTNRVRTALNSEGQPKR
RASPSENVDRIVVNMERWRWLPANLGKFYVMNNIPEFTSEIWKDDRIELKQRIVVGQPSW
PTPLLSSKMQYVIFRPSWGMPDGIKAKELMPRLRQASGNSGFGFFDQLFGGGGGYSGADV
IEAYKLQVYYNGQRVDPNSVNWKTADVRQYSFIQPPGPDNPLGMVKFRFPNKHDVYMHDT
PEKSLFSANARALSHGCMRVQDPRKTAEVILGEDKGYSPEKVGELWNSGASITLSKEVPV
YLVYFTARVGDDGQMENFPDVYGIDSRVMSAIRGRPVRFVAQEAIDPTEASEPGASAYDP
GDDQRPNRRSKKNSNPIQDALSNIFLN
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtctctcgcccatcggagccaaacggggaatgatcaaacaagtcacgcttcgc
ctagtcggcgtcagtttattgggggtttgctggatcggatgtgcgccagtcatggcggca
gagacgaccacgcaggattcctcaagcggcacgacgacgtattttccgccgaaaccgacg
tcggcagcggatgctccggttgtcacgccggcggcgccgacgacaacggctgccattccg
aaatcggctgacccgcccaagagcaatcttccggccgagcctgcggtttcgccgaagagc
agcgtacatgatgccgatccgtcggtaacggcgacggtgactccggctgccggtgagacg
cctcagtcgcaaccggcgcccgcgacaggcgatgccaagccggctgatgcaaaaccggcc
gacgtcaaacccgacgctgcgccggcccctgcaacgacggatacggctatcgtaacgcca
tcggcggacgacaagtctgccgcggataaacctgctgcagacacgccggctgcaacgcct
gcgccatcaaccgacagcaagccagacgctgctaccgcgacacctcctgcggcttctccc
gcgagcgatacagcgcagcagcccaagcccgctgagacgacgccggttgccacgccgcca
gcaccgccgccggtcaatccggtcgttctcgcggcacgcgggaagctttcggataagtcg
ttcgccagcaacagcgccaatgacgatgtgaccgccgcgcgcgattactatagtggccat
accgagccgctgtgggttcatggcggtgagttcacgcgcaaagcgaaagagatcatctcg
acgttgaaaggcgctgatgattggggtctcgattcatcggccttcgctattccggcgctc
gggagtgggtccgcttcggaaggagcggcggaggctcagttgacgctatcggcgctgaaa
tatgcgcggtatgcgcgcggcggccgtctcgatccagtgtcgctcagcaacattctcgat
atgaagccgccggtcaaagagccgaaggccgtcatgcgagagctggcgagtgcgtcagat
cccggcgcttatctgcgcggcctcaatccgaaacacatcggtttcgaacgtctacgtcaa
gcgctgttgaaggcacgtggcggggcgactgatgtcgcggatgagcctgtcgacccggcg
ctactcatcaaactaccgacgaagggcaaaacgctgaagcggggcgtcaaggacgatcag
gtttcgctgctgcggcagcgcttgaaagttcctgccgacaatccctcaaatgatcgcgtg
tacgacgatcagcttgccgatgcggttcgcgccttccagcaggcgaacggtctcaaggcc
aatggcgtggtgaccaatcgcgtgcgcaccgcgctcaacagcgaggggcagcccaagcgt
cgcgccagcccgtcggagaacgtcgatcgcatcgtcgtcaacatggagcgttggcggtgg
ctgccggccaatctcgggaagttctacgtcatgaacaacattcccgagtttaccagcgag
atctggaaagacgatcgcatcgagctgaagcagaggatcgttgtcggacagccgtcgtgg
ccgacgccgctgctgtcttctaaaatgcagtatgtgatcttccgcccgagctggggcatg
ccggacggcatcaaagccaaggagcttatgccgcgcctccggcaggcgtccggcaattcg
ggcttcggattcttcgatcagttgttcggtggcggcggcggttacagcggcgcagatgtg
atcgaagcctacaagctgcaggtctattacaacggccagagggtcgatcccaattcggtg
aattggaaaacggcggacgttcggcaatacagctttatccagccgccgggtccggacaat
ccgctcggcatggtgaagttccgtttcccgaacaagcatgacgtctacatgcacgatacg
ccggagaagagcctcttcagcgcgaatgcccgggcgttgagccacggctgcatgcgtgtt
caggatcctcgtaaaactgcggaggtcattctgggcgaagacaaaggttattcgcctgag
aaggtcggagagctttggaatagcggtgccagcatcacgctgtcgaaagaggtgcccgtt
tacctcgtctatttcaccgctcgtgtgggcgacgatggtcagatggaaaacttccccgac
gtctacggcatcgacagccgggtgatgtctgcaatccggggacgtcccgtccgcttcgtt
gcgcaggaagcgatcgatccgacggaagcttcggagccgggcgccagcgcgtacgatccg
ggagacgatcagcggccgaaccgccggagcaagaagaacagcaatcccatccaggatgcg
ctttccaacatcttcttgaactga
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