Hyphomicrobium sp. MC1: HYPMC_1004
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Entry
HYPMC_1004 CDS
T01557
Symbol
ruvA
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HYPMC_1004 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmc03400
]
HYPMC_1004 (ruvA)
DNA repair and recombination proteins [BR:
hmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HYPMC_1004 (ruvA)
RecFOR pathway proteins
HYPMC_1004 (ruvA)
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Ortholog
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GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
Transposase_20
RecR_HhH
DUF5666
Motif
Other DBs
NCBI-ProteinID:
CCB64237
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Position
970338..970967
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AA seq
209 aa
AA seq
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MIGKLKGKVDAIGESHLVIDVNGVGYEVQASTKTLRNLKVGDDVALTIDTHVREDAIRLF
GFQSEFERSWFRTLQTIQGVGAKVALSVLGVMAPQDLANAVAFGNWAAVEEAPGVGKKLA
QRIVLELKDKAPALSLGGHNIPAGGAGMAAPGPSMPPSSLAFAEALSALTNLGYNPAQAN
AAVAVASQELGDAADTAALIKRSLKELAR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggaagctcaagggcaaggtcgatgcgatcggcgaaagccacctcgtgatcgat
gtcaacggcgtcggctacgaagtgcaggcctcgacgaagacgctgcgcaatctgaaggtc
ggcgacgacgtggcgctgacgatcgatacgcacgtgcgcgaggatgcgatccggctgttc
ggatttcagagcgagttcgagcggagctggtttcgtaccctgcagacgatccaaggcgtc
ggcgccaaggttgctttgagcgtgcttggcgtgatggcgccgcaggatctcgccaacgcc
gtggcgttcggcaactgggcggcggtggaagaagcaccgggcgtcggcaagaaactcgcg
caacgcatcgttctcgaattgaaggacaaggcgccggcgctttcgctcggcgggcataac
attccggcgggtggtgcgggtatggctgctcctgggcccagcatgccgccatcgagcctg
gcgttcgccgaagcgctctcggcgctgacgaatctcggctacaacccggcgcaggccaat
gctgccgttgcggtcgcgtcgcaggaattgggagatgctgccgacactgctgcccttatc
aagcgcagcctcaaagagttggcgcgctag
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