KEGG   Hyphomicrobium sp. MC1: HYPMC_1105
Entry
HYPMC_1105        CDS       T01557                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase IV, subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
hmc  Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:hmc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hmc03032]
    HYPMC_1105 (parE)
   03036 Chromosome and associated proteins [BR:hmc03036]
    HYPMC_1105 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hmc02048]
    HYPMC_1105 (parE)
Enzymes [BR:hmc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HYPMC_1105 (parE)
DNA replication proteins [BR:hmc03032]
 Prokaryotic type
  DNA Topoisomerases
   HYPMC_1105 (parE)
Chromosome and associated proteins [BR:hmc03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    HYPMC_1105 (parE)
Prokaryotic defense system [BR:hmc02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    HYPMC_1105 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c
Other DBs
NCBI-ProteinID: CCB64336
UniProt: F8JGM8
LinkDB
Position
complement(1068016..1070022)
AA seq 668 aa
MSRSQTDLFPEFESEMTEKSSRARKPVESAYSEEHIEVLEGLEPVRRRPGMYIGGTDEKA
MHHLFAEVIDNSMDEAVAGHATWIEVELSADGFLTVTDNGRGIPIGPHPKYKNKSALEVV
MTVLHAGGKFDSKAYNTSGGLHGVGVSVVNALSETLEVQVARDQQLYRMVFSRGEPQTKL
EKLGSIMNRRGTKTRFKPDEKIFGKGAAFKPARLMKMARSKAYLFGGVEIRWKCAPELIK
DDTPAEATFHFPGGLSDYLTSSIDGRTRVTKEIFSGRVEKDEGHGSVEWAVAWISDEDGF
SSSYCNTIPTPEGGTHENGLRQALYKALRAYGELVGVKKAQQITSEDVMGTAASMLSVFI
REPEFQGQTKDKLATVEATKIVETAVRDAFDHWLADSPQQATKLLEWTIDQSEERLKRRR
EKEVGRQSATRKLRLPGKLADCSIQQAAGTEIFIVEGDSAGGSAKSARDRETQAVLPLRG
KILNVANASSAKLSQNQLLADLIQALGVGTGTKYRDDDLRYERVIVMTDADVDGAHIASL
LITFFYQEMPELVENGHLFLAVPPLYKISDKSDVAYARNEAHRDELLATHFKNKKPKVTR
FKGLGEMDFKDLKETTMDKKRRTLLRVAIDEAARDGLSEVVNALMGSKPEARFRFIQENA
AFAKDLDI
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgagccgatcgcaaactgacctttttccggaattcgaaagcgaaatgactgagaaatcg
tcgcgtgcccgcaagcctgtcgaaagcgcctacagcgaagagcacatcgaggtcctcgaa
ggcctcgaacccgtgcgccgccgccccggcatgtacatcggcggcaccgacgaaaaagcc
atgcatcaccttttcgccgaggtcatcgacaactccatggacgaggccgttgcgggccac
gccacctggatcgaggtcgagctttcggcagacggctttctgacggtcaccgacaatggc
cgcggtattccgatcggcccgcatcccaagtacaagaataagagcgcgctcgaagtcgtg
atgaccgttctgcacgcgggcggcaaattcgattccaaggcctataacacctcgggcggt
ctgcacggcgtcggcgtgtcggtcgtcaatgcgctgtccgaaacgctcgaagttcaggtc
gcacgcgaccaacagctttatcgcatggtgttctcgcgcggcgagccgcagaccaagctc
gaaaagctcggctccatcatgaaccggcgcggcacgaaaacgcgcttcaagccagacgag
aaaatcttcggcaaaggcgctgcgttcaagcctgcgcgcttgatgaaaatggcccgctcg
aaggcctacctgttcggcggcgtcgaaatccgctggaagtgtgcaccggagctcatcaaa
gacgacacgcccgccgaagcgactttccacttccccggcggcttgagcgactatctcacg
tcatcgatcgacggccgcacccgcgtcaccaaggaaatcttttcaggtcgcgtcgagaag
gacgaaggccacggttccgttgaatgggccgtcgcctggatctccgacgaagacggtttc
tcatcgtcctactgcaacacgatcccgacgccagaaggcggcacgcacgaaaacggcctg
cgccaggcgctctataaggcgctccgtgcctatggcgaactcgtcggcgtaaagaaagcc
cagcagatcacgtccgaagacgtgatgggaacggccgcgtcgatgctgtccgtcttcatt
cgagagcccgaattccagggccagaccaaagacaagctcgcgaccgtcgaggcgacgaag
atcgtcgaaaccgctgtgcgcgacgccttcgatcactggctggcagactctccacagcag
gcaacgaaactgctcgaatggacgatcgaccagtccgaagaacgcctgaagcgtcgccgc
gaaaaagaggtcggccgccaatcggcaacgcgcaagctgcgtcttcccggcaaacttgcc
gactgttcgatccagcaggccgccggcaccgaaatcttcatcgtcgagggcgactcggcc
ggcggcagcgccaagagcgcacgcgaccgcgaaacccaggccgtgctgcctttgcgcggc
aagatcctgaacgtcgccaacgcctcgtcggcgaaactgtcacagaaccagcttctagcc
gatttgatccaggcgctcggcgtgggcacgggcaccaagtatcgagacgatgacctgcgc
tacgagcgcgtgatcgtcatgaccgacgccgacgtcgacggcgcgcacattgcctcgctg
ctgatcacgttcttctatcaggaaatgccggaactggtcgaaaacggccacctcttcctg
gcggtgccgccgctctacaagatctccgacaagagcgacgttgcctacgcccgcaacgag
gcgcaccgcgacgagctgctcgcgacgcatttcaagaacaagaaaccgaaggtcacgcgc
ttcaaaggcctcggcgagatggacttcaaagacctgaaagagacgacgatggacaagaag
cgccgcacgcttctgcgtgtcgccatcgatgaagccgcgcgcgacggcctgtcagaagtg
gtcaacgctctgatgggttcgaagcctgaagcgcgcttccgtttcattcaggagaacgct
gccttcgcgaaggatctggatatttaa

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