Hyphomicrobium sp. MC1: HYPMC_1109
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Entry
HYPMC_1109 CDS
T01557
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00550
Peptidoglycan biosynthesis
hmc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HYPMC_1109
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hmc01002
]
HYPMC_1109
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
HYPMC_1109
Enzymes [BR:
hmc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HYPMC_1109
Peptidases and inhibitors [BR:
hmc01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
HYPMC_1109
Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HYPMC_1109
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
CCB64340
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Position
complement(1074836..1076497)
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AA seq
553 aa
AA seq
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MLRRVFAYASAFLIVFAVGLTSAEARDNRHAAFILDANTGAVLHNEDGDAPRHPASLTKM
MTLYLTFETLQTGRLRMADRITISEHAADQAPSKLDLKPGDQITVENAIKAIVTKSANDI
AVALAEKIGGSETNFARLMNARARAFGMSGTHYENASGLPNDEQITTAHDMATLALRLQD
DFPQYYPFFSTRVFSYGGKSYRNHNTMLNTFAGIDGIKTGYTRASGFNLVTSLHRGEKHL
VGVVFGGRTAATRNAEMRALLTRMLSRASRNKTRKPLLLARLRNEPKIAQRPIKRAPARA
EAPQPAVQADADETPVRIFKVRAVPISTKARAPSSDDTTDMEDTGPEEAPARAVPPIQAT
PGYTRVGNASPATGAQVAPIRPFAPANLASSSTSSITAPPRPLQRVAAYEPPPPALAPRP
QRRQQPQETELHDPPVIRGMPPSTLGAQARALGDASDDRFEPRRDTARTANGGRYAVQIG
AYSSIDDAQRALSNVQDRAGRLLAGVSSVTNPAMKNGHQIFRARFTGFNANRAASTCNAL
RRQAVDCFVMAGE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
gtgttgcgacgagtatttgcgtacgcatcagcttttctcatcgttttcgccgttggcctg
acgagcgcggaagctcgggacaaccgccacgctgcgtttatcctggacgccaacaccggc
gctgttctccacaatgaagacggtgatgcgccgcgtcatcccgcgtctctcaccaagatg
atgacgctgtatctgacatttgagacgctccagaccgggcgtctacgtatggccgacagg
attacgatctccgagcatgctgccgatcaggcgccctcgaagctcgacctcaaaccgggc
gatcagatcactgtcgaaaacgccatcaaggcgatcgtcaccaagtccgcaaacgacatc
gccgtcgcgcttgccgaaaaaatcggcggctccgaaaccaattttgcccgtctgatgaat
gcccgcgcccgcgcattcggcatgtcaggtacccactacgagaacgcctcgggcctcccg
aacgacgagcagattaccacagcacacgacatggcgaccctcgcgctgcgcctgcaggac
gactttccacagtactacccgttcttttccacccgggtgttttcgtatggcggcaagtcc
taccgcaaccacaacaccatgctgaacaccttcgcaggcatcgacggcatcaaaaccgga
tacacgcgcgcttccggcttcaacctcgtgacgtcccttcatcgcggcgagaaacatttg
gtcggcgttgtcttcggcggccgcaccgcggcgacgcgcaatgccgagatgcgcgccctg
ctgacgcggatgctgtcgcgcgcctcccgcaacaaaacccgcaagccgctgctgctcgcc
cgtctaagaaacgagccgaagatcgcgcaacgccccataaagcgcgcgccggcccgcgcg
gaagctccacaaccggctgtccaggccgacgccgatgaaacgccggtccgtatcttcaaa
gtccgtgcggtgccgatctcgacgaaggcgcgcgcgccctcgtccgacgacacgaccgac
atggaagacacaggccccgaagaagccccggcccgagccgttccgccgatccaggcaacg
cccggctacacgcgcgtcggcaacgcttccccggcgacgggagcccaggtcgcgccaatt
cgcccattcgctccggcgaaccttgccagctccagcacctcgtcgataaccgcgccacct
cgccctctgcagcgcgtcgcggcctatgaaccgccgccgccagcgcttgccccgcggccg
cagcgacgtcagcagccgcaagagaccgaactgcacgacccgccggttatccgtggcatg
ccgccgtctacgctgggcgcccaagcccgcgcgttaggtgacgcgtcagacgatcggttt
gaaccgcgccgggacacggctcggacggcaaatggcggtcgctatgccgttcagatcggc
gcctatagctcgatcgacgacgcccagcgcgccttgagcaacgtccaggatcgtgccgga
cgccttctcgccggcgtttcctcggtcaccaacccggcgatgaagaacggccaccagatc
ttccgggcccgcttcaccggcttcaacgccaatcgtgccgcctcgacgtgcaacgcactg
cgtcgccaggcggtcgattgcttcgtcatggcgggcgagtaa
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