Hyphomicrobium sp. MC1: HYPMC_1112
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Entry
HYPMC_1112 CDS
T01557
Symbol
clpA
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hmc03110
]
HYPMC_1112 (clpA)
Chaperones and folding catalysts [BR:
hmc03110
]
Heat shock proteins
HSP100
HYPMC_1112 (clpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_lid_9
AAA_5
Clp_N
AAA_22
Sigma54_activat
AAA_16
RuvB_N
AAA_18
nSTAND3
Mg_chelatase
TniB
AAA_7
AAA_3
AAA_14
TIP49
RNA_helicase
bpMoxR
TsaE
NACHT
IstB_IS21
AAA_6
AAA_28
AAA_25
Torsin
NBD_SMAX1
DnaB_C
IPT
Motif
Other DBs
NCBI-ProteinID:
CCB64343
UniProt:
F8JGN4
LinkDB
All DBs
Position
1077516..1079969
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AA seq
817 aa
AA seq
DB search
MTSLSKNLEASLHRAVQYANVRHHEFATLEHLLLALVDDRDAAAVMRACSVDLEQLRARL
IEYLDTELKPIVSKSARDAHPTNSFQRVVQRAIVHVQTSGREEVTGANVLVGIFSERESH
AAYFLQEQEMTRFDAVQYIAHGIAKRPGMFEPRTVRGVDEEVNSTESEEKKPGDALNTYC
VNLNKKARDGKIDPLIGREQEVLRTIQVLCRRQKNNPLLVGDPGVGKTAIAEGLARKIVQ
GQVPDVLKGATIFSLDMGALLAGTRYRGDFEERLKAVMKEVEAFPGAVLFIDEIHTVIGA
GATSGGAMDASNLLKPALQSGALRCIGSTTYKEYRQHFEKDRALVRRFQKIDVKEPSVED
AIEILKGLKSVFEDYHKIKYTNEAIKAAVELSAKYIHDRKLPDKAIDVIDETGASQMLLP
ESKRKKKITTKEIEATVATMARIPPKTVTKSDAEVIAHIGRDLKRLVFGQDKAIEALSSA
IKLARAGLREPEKPIGCYLFSGPTGVGKTEVAKQLANLMGVELLRFDMSEYMEKHTVSRL
IGAPPGYVGFDQGGLLTDGIDQHPHCVLLLDEIEKAHPDLFNILLQVMDHGKLTDHNGKS
VDFRNVVLIMTTNAGASDMAKPPMGFNRTKREGEDTEAVAKLFTPEFRNRLDAVVPFAGL
SPEIIAQVVEKFIFQLEAQLADRGVSIELSDEATRWLAEKGYDEKFGARPLARVIQEYIK
KPLAEELLFGKLENGGTVKVLVAGKGPDRTLTFDFLPLDPSKKVKTPDDEETDEDDGPQP
VLADATPKKALPGPKEKGDKPNGSGAVPSVPRKKKDE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
ttgacatcgctctccaaaaatcttgaagcctcgctgcaccgggcggtgcagtatgcaaac
gtccgtcaccacgaatttgcgacgctggagcatctgcttctggcgctcgttgacgaccgg
gatgcggccgccgtgatgcgtgcctgctcggttgatcttgagcagctcagggcgcgcctg
atcgaatatctggatacggaactgaagccgatcgtatccaagtcggccagggatgcgcac
ccgacgaattcgttccagcgcgtcgtccagcgggcgatcgtgcatgtgcagacatccgga
cgcgaagaggtgacgggcgcgaacgttctggtcgggattttctcggaacgcgagagccat
gccgcctacttcctgcaggagcaggaaatgactcgcttcgatgcggtgcagtatatcgca
cacggcatcgcgaagcggccgggcatgttcgagccgcggacggttcgtggcgtcgacgag
gaagtcaattcgaccgagagcgaagagaagaagcccggcgacgcgctcaacacttactgc
gtcaacctcaataaaaaggcccgcgatggcaagatcgatccgctgatcggccgcgagcaa
gaggtgctgcgcacgattcaggttctctgccgccggcagaagaacaacccgttgctggtt
ggcgatccgggcgtcggcaagacggccattgctgaaggcttggcgcgcaagattgtgcag
gggcaggttcccgacgttctcaagggcgcaacgatcttctcgctggatatgggcgcgctg
cttgccggcacgcgctatcgtggcgacttcgaagagcggcttaaggccgtgatgaaggag
gtcgaagctttcccgggagccgtgctgttcatcgacgagatccacaccgttatcggtgcg
ggtgcgacgtcgggcggcgcgatggatgcttcgaacctgctgaagccggcgcttcagtcg
ggcgcgctgcgctgcatcggctcgacgacctacaaggagtatcgccagcacttcgagaag
gatcgcgctctcgtccgtcgattccagaaaatcgacgtcaaggagccgtccgtcgaggat
gccatcgagatcttgaagggtctgaagtcggtcttcgaggactatcacaagatcaagtac
acgaacgaggccattaaggccgcggtcgaactgtcggcgaagtacatccacgaccgtaag
ctgccggacaaggcgatcgacgtgatcgacgaaaccggcgcgtcgcagatgctgcttccc
gaaagcaagcggaagaaaaagatcaccaccaaggagatcgaagcgaccgtcgcaacgatg
gcgcgcattccgccgaaaaccgtcacgaagagcgacgccgaagtcattgcgcacatcggg
cgcgatctgaagcggctggtgttcggtcaggacaaggcgatcgaagcgctttcgagcgcg
attaaactggcccgtgccggtttgcgcgagcccgagaagccgatcggttgctacctgttc
tccggcccgaccggcgtcggcaagacggaagttgccaagcagcttgcgaacctgatgggc
gtcgagctgctacgcttcgacatgtcggaatacatggagaagcacacggtttcccgtctg
atcggcgctcctccgggctatgtcggttttgatcagggcggccttctgactgatggcatc
gatcagcatccgcattgcgtgctgctgctcgatgagatcgagaaggcgcatccggacctg
ttcaacatcctgttgcaggtcatggatcacggcaagctgacggaccataacggtaagtcg
gtcgatttccgcaacgtcgtgctgattatgacgacgaacgcgggggcgtccgacatggcc
aagccgccgatgggcttcaatcggacgaagcgcgaaggcgaggatacggaagccgtggcc
aagctgttcacgcccgagttccgtaaccgtcttgatgccgtcgtgccgttcgccgggttg
tcgcccgagatcatcgcgcaggtcgtcgagaagttcatcttccagctcgaagcgcagctc
gcagatcgcggcgtttcgatcgagctgtcggatgaggcgacgcgctggcttgcggagaag
ggttacgacgagaagttcggtgctcgtccgttggcgcgcgtcatccaggagtacatcaag
aagccgctggcagaagagctgctgttcggcaagctcgaaaacggtggcacggtgaaggtg
ctggttgccggcaaagggccggatcggacgctgacgttcgatttcctgccgcttgatcct
tcgaagaaggtgaagacgccggacgacgaagaaaccgacgaagacgatggcccacagccg
gtcctggccgacgcgacgccaaagaaggcgcttcccggtccgaaggagaagggcgacaag
cccaacggatcgggtgcggtgccgagcgtgccgcggaagaagaaggacgagtag
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