Hyphomicrobium sp. MC1: HYPMC_1172
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Entry
HYPMC_1172 CDS
T01557
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase omega chain (RNAP omega subunit) (Transcriptase omega chain) (RNA polymerase omega subunit)
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HYPMC_1172 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmc03021
]
HYPMC_1172 (rpoZ)
03400 DNA repair and recombination proteins [BR:
hmc03400
]
HYPMC_1172 (rpoZ)
Enzymes [BR:
hmc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HYPMC_1172 (rpoZ)
Transcription machinery [BR:
hmc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HYPMC_1172 (rpoZ)
DNA repair and recombination proteins [BR:
hmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HYPMC_1172 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
CCB64403
UniProt:
F8JHE6
LinkDB
All DBs
Position
1135008..1135460
Genome browser
AA seq
150 aa
AA seq
DB search
MARVTVEDCVDKIPNRFELVLLAAHRARAITNGSAITIAPDDDKNPVIALREIAERTLSP
DDMRETLISSIQKNTEVDEPEAVAAPLLPPERRAPMLGRDDLSSDTQVDVMTEEQLLRGL
ESMTPLEPSANIGSGSGPRERDRDPRDRGR
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtcaccgtcgaagattgcgtcgacaaaattcctaaccggtttgagctggtg
cttctcgccgctcacagggctcgcgcgatcacgaacggaagtgcgattacgattgcgcct
gatgacgacaagaatccggtcatcgccctgcgcgagattgcagagcgcacgctttctccc
gacgacatgcgcgagacgctgatctcttccatccagaagaatactgaggtcgatgagccg
gaagcggttgcagcaccgttgctgccgccggagcgtcgcgcgccgatgctcggccgcgat
gacctttcgtccgacacgcaagtcgacgtcatgacggaagagcagcttttgcgcggcctt
gaaagcatgacgccacttgagccgtcggccaacatcggatccggctcgggtccgcgcgag
cgggatcgcgatccgcgcgaccgcggccgctga
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