Hyphomicrobium sp. MC1: HYPMC_1352
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Entry
HYPMC_1352 CDS
T01557
Symbol
gyrA
Name
(GenBank) DNA gyrase, subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmc03032
]
HYPMC_1352 (gyrA)
03400 DNA repair and recombination proteins [BR:
hmc03400
]
HYPMC_1352 (gyrA)
Enzymes [BR:
hmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HYPMC_1352 (gyrA)
DNA replication proteins [BR:
hmc03032
]
Prokaryotic type
DNA Topoisomerases
HYPMC_1352 (gyrA)
DNA repair and recombination proteins [BR:
hmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYPMC_1352 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CCB64583
UniProt:
F8J563
LinkDB
All DBs
Position
complement(1268751..1271621)
Genome browser
AA seq
956 aa
AA seq
DB search
MARRRAGGIRFPFQLQYKHWFPVGRWCVSPPPISSRKELTLTDNNDEENPSGREPSDIRP
ISISDEMKRSYLDYAMSVIISRALPDVRDGLKPVHRRILFAMHELGLDWNKKYVKSARIV
GEVMGKYHPHGNLAIYDALVRLAQDFSMRVPLVDGQGNFGSIDGDPPAAERYTESRLAKV
AGFMLDDLDNDTVDYRDNYDGTIQEPTVLPSKFPNLLVNGAGGIAVGMATNIPPHNLGEV
IDACIADLDNPEVSLEDLTQIIQGPDFPTAGIILGRGGILNAYHKGRGSIIMRARVKVEN
IRKDREALVVTEIPYQVNKRTLIEKIADLVRDKKIEGISDLWDESNREGIRIVIELKRDA
VADVVLNNLYKYSDLQTTFGANMLAINGGRPESLNLKDFISAFTSFRQEVVTRRIKHLLN
KARARAHVLVGLAIAVANIDEVIKLIRYSASPAEAKEQLMARDWPAKDMTPLIELIADPR
HKVSAEGTYRLSEEQAKSILELRLARLTALGRDEISDELNKIATEIKEYLTILASRARVV
DIVKGELQSIKDEFATPRKTEIMDFDGDVEDEDLIQREDCVVTVSHKGYIKRVPLAAYRA
QRRGGKGRSGMSTRDEDFVTQLFVTSTHTPVLFFSSRGMCYRMKVWRLPAASPQSPGKAL
VNLLPLEEGEAITSILPLPEDSSTWGDLELIFATRSGNVRRNALADFESINRNGKIAMKL
DEGDRIVQVGISTPNQDVLLTSAEGQCIRFLISDEIRLFKGRDSTGVRGIRLDDGDEVIS
MAILNHFEAPAEERAAYLKQANALRRSEDAEDAETVPAESDGEEASGDAITLTPERFAEM
QAAEQFVLTVSNRGFGKRSSSYEFRTSGRGGKGIVAMVANERNGRLLASFPIGENDQIML
VTDGGQLIRCPVHDIRIAGRNTQGVRIFKTDADEKVVSVERITEEEAEESQEAVSE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
gtggcacgacgccgcgcaggtggcattcggtttccgtttcagctacagtataagcactgg
tttcccgtcggccgctggtgcgtatcacccccgccgatctcatcccggaaagagctgact
ttgaccgacaataacgacgaagaaaatccgtccggccgcgagccgagcgacatccgcccg
atctccatctcggacgagatgaaacgctcctatctcgactacgcgatgagcgtcatcatc
tcccgcgcgcttcctgacgtgcgcgatggcttaaagcccgtccaccgccgcattctcttc
gcgatgcacgagctcgggctcgactggaacaagaaatacgtcaagtcggcgcgcatcgtc
ggcgaagtgatgggcaaatatcacccgcacggcaaccttgcgatctacgacgcgcttgtg
cgcctcgcgcaggatttctccatgcgcgtgcccctcgtcgacggccagggcaacttcggc
tcgatcgacggcgatccgcctgcagccgaacgctacacggaatcgcgtctcgccaaggtc
gcgggcttcatgctcgatgacctcgacaacgacaccgtcgattatcgcgacaactatgac
ggcacgattcaagagccgaccgttctgccctcgaaattcccgaacctgctcgtcaacggc
gcaggcggcatcgcggtcggcatggcgaccaacatcccgccgcacaacctcggcgaagtc
atcgacgcctgcatcgccgacctcgacaatcccgaggtcagtctcgaagacctgacgcaa
attatccagggcccggacttcccgacggctggcatcatcctcggccgcggcggcattctc
aatgcctaccacaagggccgcggctcgatcatcatgcgcgcccgcgtcaaggtcgagaac
atccgcaaggaccgtgaggcgctcgtcgtcaccgagatcccctatcaggtcaacaagcgc
acgctgatcgaaaagatcgccgatctcgtgcgcgacaagaagatcgaaggcatctccgac
ctttgggatgaatcaaaccgcgaaggcatccgcatcgtcatcgaattgaagcgcgatgcc
gtcgccgacgtggtgctcaacaacctctataaatattcggacctgcagacgacgttcggc
gccaacatgctggcgatcaacggtggccgcccggaaagcctgaacctcaaggacttcatc
tcggccttcacgagcttccgccaggaagtcgtgacgcgccgcatcaagcacttgttgaac
aaggcccgcgcccgcgctcacgtcctcgtcggcctggccatcgccgtcgccaacatcgac
gaagtcatcaagctcatccgctattcggcatcgcccgccgaagccaaagagcagttgatg
gcgcgcgactggcccgccaaagatatgacgccgctgatcgaactcattgccgatccgcgc
cacaaggtttcggccgaaggcacgtatcgcctctcggaagagcaggccaagtcgatcctc
gaactgcgcctcgcccgcctcaccgccctcggccgggacgaaatttccgacgagttgaac
aagatcgcgaccgagatcaaagaatacctcacgatcctcgcttcgcgcgcccgcgtcgtc
gacatcgtcaagggcgagctgcagtcgatcaaggacgaattcgcgacaccgcgcaaaacc
gagatcatggatttcgacggcgacgtcgaagacgaagacctcattcagcgcgaagactgc
gtcgtgaccgtcagccacaagggctacatcaagcgcgtgccgctcgccgcctatcgcgcc
cagcgccgcggcggcaaaggtcgctccggcatgtcgacgcgcgacgaggatttcgtcacg
cagttgttcgtgacctcgacgcacacgcccgtgctgttcttctcctcgcgcggcatgtgc
tatcgcatgaaggtctggcgcttgccggctgcgtcgccgcagtcgccgggcaaggcactc
gtcaacctgctgccgctggaagaaggcgaagccatcacctcgatcctgccgctgccggag
gattcctccacctggggcgaccttgagctgatcttcgccacccgttccggcaacgtccgc
cgcaacgctctggcggacttcgagagcatcaatcgtaacggcaagatcgcgatgaagctc
gacgagggcgaccgcatcgtgcaggtcggcatctcgacaccgaaccaggatgtgctgctg
accagcgcggaaggccagtgcatccgcttcctgatctccgacgaaattcgcctcttcaaa
gggcgtgactcgaccggcgttcgcggcatcaggctcgatgacggcgacgaagtgatctcg
atggcgatcctcaatcacttcgaggcgcccgccgaagaacgcgccgcctatctgaagcag
gcgaacgcacttcgccgctcggaagatgccgaggatgccgaaaccgttccggcagagagc
gacggcgaggaagccagcggcgacgccatcacgctcacgccggagcgcttcgccgaaatg
caggctgccgagcagttcgtgttgacggtgtcgaacaggggcttcggcaagcgctcgtcg
tcatacgagttccgcacctcgggccgcggcggcaaaggcatcgtcgcgatggtcgcgaac
gagcgcaacggccgtctgctcgcctcgttcccgatcggtgaaaacgaccagatcatgctg
gtgacggacggcggccagctgatccgctgcccggtgcacgacatccgcatcgccggccgc
aacacgcagggcgtccgcatcttcaagaccgacgcggatgaaaaggtcgtctcagtcgag
cgcatcaccgaggaagaagccgaagaatcgcaggaagccgtcagcgagtaa
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