Hyphomicrobium sp. MC1: HYPMC_1400
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Entry
HYPMC_1400 CDS
T01557
Symbol
alaS
Name
(GenBank) alanyl-tRNA synthetase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HYPMC_1400 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hmc01007
]
HYPMC_1400 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmc03016
]
HYPMC_1400 (alaS)
Enzymes [BR:
hmc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
HYPMC_1400 (alaS)
Amino acid related enzymes [BR:
hmc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HYPMC_1400 (alaS)
Transfer RNA biogenesis [BR:
hmc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HYPMC_1400 (alaS)
Prokaryotic type
HYPMC_1400 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
PUMA_CC
Leu_zip
Motif
Other DBs
NCBI-ProteinID:
CCB64630
UniProt:
F8J602
LinkDB
All DBs
Position
1314713..1317406
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AA seq
897 aa
AA seq
DB search
MAGVSEIRASFLDFFGKNGHEIVPSSPLIPRNDPTLMFTNAGMVQFKNVFTGQETRAIPR
ATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKERAIELAWNLLTKDFGL
KKDKLLVTIYHTDDEAYRIWKKISGFSDDKIIRIATSDNFWQMGDTGPCGPCSEIFFDHG
DKIPGGPPGSADADGDRFIEIWNLVFMQFEQIAPGNRVDLPRPSIDTGMGLERIAAVLQG
KHDNYDIDLFQHLIQAIRQEATKVGAKESAATKDFDHVARRVIADHLRSTSFLIADGVLP
SNEGRGYVLRRIMRRAMRYAHQMGCTDPLMYLLVPSLVREMGDAYPELVRAQPLITETLK
LEETKFKRTLDNGLKLLGESSAGLTKGAVFPGDVAFKLYDTYGFPLDLTEDALKPRGITV
DTGAFDAAMKKQKDAAKAAWKGSGEAATEGLWFEIKDKTGATEFLGYDTESAEGIVAAVV
AGGKEASELKAGEEGAIIVNQTPFYGESGGQVGDRGVIKGPKGTLFRVTDTQKKLGDLFV
HFGKVESGAFKVGEAVELEVDHGRRSATRANHSATHLLHEALRQVLGTHVAQKGSLVSPD
RLRFDFSHTKPMSADEIKQVEDMANAVLLENTPVVTRLMALDDARATGAMALFGEKYGDE
VRVVSMGATRPGANKAWSVELCGGTHVSRTGDIGLIRVVAESGSSAGVRRLEALTGEGAR
AYLDEQDARVKEAASVLKTRPEDLVDRLKHLVEERRNLEKQLADAKRQIALGGGAGADGA
ATNGEAIRNVGNVKLLARTVQGLNPKDLRGLIDDGKKQVGSGIVAVVGVTEDGKAGLAVG
VTDDLVKTWSAVDLVKAGAEALGGKGGGGRPDMAQAGGPDGAKAGDALKAIEERLAS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgtcagcgaaatccgcgcttcgtttctcgatttctttggcaagaacggacac
gagatcgtgccgtcgtcgccgctcattccgcgcaacgacccgacgctgatgttcacgaac
gcgggcatggtgcagttcaagaacgttttcacagggcaggagacgcgggccattccgcgg
gcgacgacgtcgcagaagtgcgtccgcgccggcggcaagcacaacgacctcgacaacgtc
ggctatacggcgcgccaccacacgttcttcgagatgctcggcaacttctcgttcggcgac
tatttcaaagagcgcgcgatcgagcttgcctggaacctgctgacgaaggacttcggcctc
aagaaagacaagctgctcgtcacgatctatcacaccgacgacgaagcctatcgcatctgg
aagaagatctccggcttctccgacgacaagatcattcgcatcgcgacgtccgacaacttc
tggcagatgggcgatacggggccgtgcggtccgtgctcggaaatcttcttcgatcacgga
gacaagattcccggcgggcctccgggctcggcggacgcggacggcgaccgcttcatcgaa
atctggaacctcgtgttcatgcaattcgagcagatcgcgccgggcaaccgcgttgacctg
cctcggccgtcgatcgacacgggcatggggctcgagcgcatcgcagcggtgctgcaaggc
aagcacgacaactacgacatcgatctgtttcagcatctcatccaggcgatccgccaggaa
gcgacgaaagtcggcgcgaaggaaagcgcggcgacgaaggatttcgatcacgtcgcgcgg
cgcgttatcgccgaccatttgcgttcgaccagcttcctgatcgccgacggcgtgctgccg
tcgaacgaaggccgtggctacgtgcttcgccgcatcatgcgccgcgccatgcgctatgcg
caccagatgggctgcaccgatccactgatgtatctgctcgtgccgtcgctcgtccgcgag
atgggtgacgcctatccggaactcgtccgcgcgcagccgctcatcactgagacgctgaag
ctcgaagagacgaagttcaagcgcacgctcgacaacggcctaaagctgttgggcgaaagc
tcggcgggtctcacgaagggcgcggtattccccggcgacgtcgcgttcaagctctacgat
acgtacggcttcccgctcgatctcaccgaggacgcgctgaagccgcgcggcatcaccgtc
gatactggcgcgttcgatgcagcgatgaagaagcagaaggatgccgccaaggccgcctgg
aagggttcgggcgaagcggcgacggaaggcctctggttcgaaatcaaggacaagaccggc
gcgaccgagttcctcggctatgacaccgagagtgcggaaggcatcgtcgcggccgtcgtg
gcaggtggcaaagaggcctccgaacttaaagccggtgaggaaggcgcgatcatcgttaac
caaacgccgttttacggggagagcggcggtcaggtcggcgaccggggcgtcatcaaaggt
ccgaaaggcacgctgttccgcgtgaccgatacgcagaagaagctcggcgatctgttcgtg
catttcggcaaagtcgagagcggagcgttcaaggtcggcgaagcggtcgagctcgaagtc
gatcatgggcggcgctcggcgacgcgcgccaaccattccgcgacgcatcttctgcatgag
gcgctgcggcaggtgctcggcacacacgtcgcgcagaagggctcgctggtttcgcccgat
cgtctgcgcttcgacttctcgcatacgaagccgatgtcagcagacgagatcaagcaggtc
gaggacatggcgaacgccgtgctgctcgaaaacacgccggtcgtcacgcggctgatggcg
cttgacgatgcgcgcgcgacgggcgcgatggcgctgttcggcgagaagtacggcgatgaa
gtgcgcgtcgtgtcgatgggtgcgacgcggcccggcgccaacaaggcgtggtcggtcgag
ttgtgcggcggcacgcacgtatcgcgcacgggcgatatcggtctcattcgcgtcgtcgcc
gaaagcggtagctcggcgggcgtccgccgtctcgaagcgctgacgggtgagggcgcgcgc
gcctatctcgatgagcaggatgcacgcgtgaaggaagcggcgagcgtgctcaagacacgg
ccggaagatctcgtcgatcgcttgaagcatctcgtggaagagcgccgcaatcttgaaaag
cagcttgccgatgcgaagcgccagatcgcgcttggcggtggtgcgggcgcggatggcgcg
gcaacgaatggcgaagcgatccgcaatgtcggcaacgtcaagctgctcgcgcgtacggtg
caggggctcaatccgaaggacctgcgcggcctcattgatgacggcaagaagcaggtcggc
tcgggcatcgtcgccgtcgttggcgtgacggaggacggcaaggcgggcctcgcggtcggc
gtcacggacgatctcgtcaagacgtggagcgcggtcgatctcgtcaaggccggtgcggaa
gcactcggcggcaaaggcggcggcgggcgtcccgacatggcgcaggcggggggaccggac
ggcgcaaaagcgggcgatgcgctaaaggccatcgaagaacggctcgcgagctga
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integrated database retrieval system
