Hyphomicrobium sp. MC1: HYPMC_1405
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Entry
HYPMC_1405 CDS
T01557
Name
(GenBank) tRNA/rRNA methyltransferase (SpoU)
KO
K02533
tRNA/rRNA methyltransferase [EC:2.1.1.-]
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmc03016
]
HYPMC_1405
Transfer RNA biogenesis [BR:
hmc03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
HYPMC_1405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
TrmJ_C
TerY_C
Motif
Other DBs
NCBI-ProteinID:
CCB64635
LinkDB
All DBs
Position
1321067..1322344
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AA seq
425 aa
AA seq
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MNVETETSAGDALRIMVGSGEPVLGPRATRVCEVVHACHAGSIDQGLEKLAIPGLTRDTL
EPVLQYCASLTCISDEVTCPGCKRRTEVQGIETLDQFVLSKKEVIVGHGRVRLKGEGTET
VSTPCLETLAKQWSGENYWFWARRVIRKLRHGLRRANMRGEPVAGEGETPSVILMEPQLA
DNIGMVARACANFGLDDLRLVSPRDGWPNEKARIAASGANYIIDDARAYSSLDESISDLN
WIAATTARQRDLRKPVLTPEQAIAEMRTRIGRGERCGILFGRERNGLETSEVAHADALIM
IPVNSRFASLNLAQAVLLTGYEWMRGDSGRSLGRVTTYEKPLTEGLYMGRDRPATKEELI
GLFEHLERELEASGFFNPAHRKTVVSQNLRTLLTRMNATEQEVRTLRGIVATLAQGKGKA
RKGGD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgtcgagactgagacttcggcaggcgatgcgctccgcatcatggtcggcagcggc
gagcctgtgctcggaccgcgggcgacgcgcgtttgcgaagtcgttcacgcctgtcacgcc
ggctcgatcgatcaagggcttgaaaagctcgccattccagggctgacgcgcgatacgctc
gaacccgtcttgcaatactgcgccagcctcacgtgcatctcggacgaggtgacgtgtccg
ggctgcaagcggcgcacggaagttcagggcatcgagacgctcgatcaattcgttctcagc
aagaaagaagtgatcgtcgggcatgggcgcgtgcgcctgaagggggaggggacggaaacg
gtctcgacgccatgtctcgaaacgctcgccaagcaatggtcgggtgagaattattggttc
tgggcgcggcgtgtcattcgcaagctgcgtcacggtttgcggcgggcaaatatgcgcggc
gagccggtggcgggcgagggcgagacgccgtcggtcattctcatggagccgcagcttgcc
gacaacatcggcatggtggcgcgcgcctgcgcgaatttcggtctcgacgatcttcgactc
gtcagtccgcgcgacggctggccgaacgagaaagcgcgcattgcggcctcgggcgccaat
tacatcattgacgacgcgcgcgcctattccagtctcgacgagagtatttcggatctcaac
tggatcgcggcgacgacggcgcggcaacgggatctgcgaaagccggtcctgacaccggag
caggcgatcgccgagatgcgcacccggatcggccgaggggagcggtgcgggattttattc
gggcgtgagcgtaatgggctggagaccagcgaagttgcccatgcagacgctttgatcatg
attcctgtcaattcccggttcgcgtcgcttaaccttgcccaggctgtgctgctaacggga
tacgagtggatgcggggggattctgggcgaagcctcggccgtgtcacaacctatgaaaag
cccctgaccgaggggctttacatgggccgggacaggccggcgacgaaagaggaacttatt
ggactatttgaacatttagaacgggagctggaagcgagcgggtttttcaatccagcccac
cgcaagacggtcgtgtcgcaaaatcttcgcacactgctgaccagaatgaacgcgacggag
caagaagtccgcacccttcgtggcatagttgcaacgctcgcacagggcaaaggaaaggcc
cgaaaagggggggattaa
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