Hyphomicrobium sp. MC1: HYPMC_2028
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Entry
HYPMC_2028 CDS
T01557
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00550
Peptidoglycan biosynthesis
hmc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HYPMC_2028
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hmc01002
]
HYPMC_2028
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
HYPMC_2028
Enzymes [BR:
hmc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HYPMC_2028
Peptidases and inhibitors [BR:
hmc01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
HYPMC_2028
Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HYPMC_2028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Tab2-like_C
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
CCB65250
UniProt:
F8JDI0
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All DBs
Position
1922017..1923195
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AA seq
392 aa
AA seq
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MWKTRSICLVIVAIAGLLAVVLQNAEAAETGFATKAPHAMLMDAETGAILYQHNADELFP
PASMSKLMTLEVLFRAIKEGRVKKTDEYKMSVNAWRNGGAPSGTSAMMVPVNTTVTVDEL
IQGVAVQSGNDAAMCIAENMAGTEGAFARMMNEEARRIGLKKSTFGNSTGLPDPHQLMTA
RELAILARYIIREYPDFYPVFSQKEFRYRQHRFINRNPLLFLNIGADGMKTGHIAAAGYG
LVGSAVQDGKRLIVVVSGLEKADQRKDEAAKLLTWGFQSFSAVKLFNAGEIVGQARVWGG
KTWYVPLAAKGDVMFTMPKYPANQRISAEIVYKAPLKPPVKKGDQVATLRISSSSSASAE
VPLYATEDVSNGGIVRQGVDSLVLMALRRLAL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagacgcggagcatttgtctcgtcattgttgcgatcgcagggctgcttgcggtc
gtgttgcaaaatgcggaagccgctgagacggggttcgcgaccaaggcaccgcatgccatg
ctgatggacgcggaaacgggcgccatcctctatcagcacaacgccgacgagcttttcccg
ccagcgagcatgagcaagctgatgacgctggaggtgcttttccgcgccatcaaggaaggc
cgcgttaaaaagaccgacgaatacaagatgagcgtcaacgcctggcgcaacggcggcgca
ccgtcgggcacgtcggcgatgatggtgccggtcaatacgacggtgacggtcgatgagctt
attcaaggagtcgcggttcagtcgggcaacgatgccgccatgtgcatcgccgagaacatg
gctggaaccgaaggcgcgtttgcgcggatgatgaacgaggaggcgcgacggatcggcctc
aaaaaatcaacgttcggcaattcgacgggactgcctgatccccaccagctgatgacggcg
cgggagcttgccattctggcgcgctacatcatccgcgaatatccggacttctacccggtt
ttcagccagaaggaatttcgctaccgccagcatcgcttcatcaatcgcaatccgctgctg
ttcttgaacatcggcgccgatggcatgaagaccgggcatatcgcggctgccggctatggc
ctcgtcggctcggccgttcaggacggcaagcggctgatcgtcgtcgtcagcgggctggag
aaagcggatcagcgaaaggacgaggctgcgaagcttctgacgtggggctttcagtcgttc
agcgcggtcaagcttttcaacgcgggtgagatcgtcgggcaagcgcgcgtctggggcggg
aagacttggtatgtaccgctcgccgccaagggcgacgttatgtttacgatgcctaaatat
ccggcaaatcagcggatctcggcagaaatcgtctataaggcgcccctgaagccgccggtg
aagaaaggcgatcaggtcgcgacgctgcgtatttcgagttcaagcagcgcatcggccgaa
gtgccgctctatgctacggaggacgtttcgaacggcgggatcgtccgccagggcgtcgac
tcccttgtgctaatggccttgcgccggctggcactctag
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