Hyphomicrobium sp. MC1: HYPMC_2030
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Entry
HYPMC_2030 CDS
T01557
Name
(GenBank) AAA ATPase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc03030
DNA replication
hmc03430
Mismatch repair
hmc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYPMC_2030
03430 Mismatch repair
HYPMC_2030
03440 Homologous recombination
HYPMC_2030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmc03032
]
HYPMC_2030
03400 DNA repair and recombination proteins [BR:
hmc03400
]
HYPMC_2030
Enzymes [BR:
hmc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYPMC_2030
DNA replication proteins [BR:
hmc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYPMC_2030
DNA repair and recombination proteins [BR:
hmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYPMC_2030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
NACHT
AAA_16
Mg_chelatase
nSTAND3
RuvB_N
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
CCB65252
UniProt:
F8JDI2
LinkDB
All DBs
Position
1923855..1924976
Genome browser
AA seq
373 aa
AA seq
DB search
MARAPLGADIEALPEADRLDDFPHPRETRALYGQDAAQEVFAEALAGGRMHHAWLLAGPA
GIGKATLAYLVARAALAEPDERDMFGQGLTIEPDSRTDRQVRALSHPALFVIRRPYDQKT
KRFPQTIPIDEVRKLKGFLSLSSGDEGRRVVIVDSADELNQNAANALLKSLEEPPGRTIF
LLVTSAPGRLLATIRSRCRVIAMLPLSDSDLKRAAAQALTAAEMALPEEHDWDKLLPLAG
GSVGRALILLGGGGLGLQARIDHILGGLPKLDLRTVHGLADELQPVAQDRKFQLFMDLFQ
ASLGRLISAAATGEGAPRDVELAARLIGPQRLATFAELWETLARDKADTVTLNLDRKSLI
LGSFARLEAASRG
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgcgccattgggggctgacatcgaggcgttgccggaagcggatcggctcgat
gattttccgcacccgcgcgagacgcgcgctctctatggccaggacgcagcgcaagaggtg
tttgcagaagcactcgccggcgggcgcatgcatcatgcgtggttgctcgcggggccagcc
ggtatcggcaaggcgacgctcgcttatctcgtggcgcgtgcggcgctcgccgaacccgac
gagcgcgatatgttcgggcagggtctcacgatcgaaccggactcgcggacggatcggcag
gtgcgcgcgctttcgcatccggcgctgttcgtcatccggcggccgtacgatcagaagacg
aagcgctttcctcagactatcccgattgacgaagtgcgcaagctcaaaggctttctgtcg
ctcagctcgggcgacgagggccggcgcgtcgtcatcgtcgacagcgccgatgagctcaat
cagaacgcggccaacgcgcttttgaagtcgctcgaagagccgccggggcgaacgatcttc
ctgctcgttacgtcggcgccgggacggttgctcgcgacgatccggtcgcggtgccgcgtc
attgcgatgctgcctctctcggacagcgatctgaagcgcgctgctgcgcaggcgctgacg
gcggcggagatggcgctcccggaagagcatgactgggacaaactcttgccgctggcaggt
ggcagcgtcgggcgggcgctcatcctgctcggcggcggcgggcttggcctgcaggctcgt
atcgaccatatcctcgggggcctgccgaagctcgacctcagaaccgtgcacggccttgcg
gatgagctacaacccgtagcccaggaccggaaattccagctcttcatggaccttttccag
gcgagcctggggcggctgatctcggcagctgcgacgggcgagggggcgccgcgcgacgtg
gagctggcggcccggctgatcgggcctcagcgccttgcgacttttgccgagctatgggaa
acactggcccgcgacaaggctgacaccgttacgctcaaccttgaccgcaaatcgctcatc
ctcggaagtttcgcgcgcctcgaggcagcgagccgcggctga
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