Hyphomicrobium sp. MC1: HYPMC_2038
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Entry
HYPMC_2038 CDS
T01557
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmc03400
]
HYPMC_2038 (radA)
DNA repair and recombination proteins [BR:
hmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HYPMC_2038 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
AAA_16
RecA
DnaB_C
Lon_C
NTPase_1
AAA
AAA_22
nSTAND3
NACHT
AAA_24
AAA_30
ABC_tran
AAA_14
DUF7129
NPHP3_N
HepII_C
SLFN-g3_helicase
MeaB
AAA_5
Rad51
ATPase_2
DAP3
Zn_ribbon_3
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
CCB65260
UniProt:
F8JDJ0
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All DBs
Position
complement(1931918..1933294)
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AA seq
458 aa
AA seq
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MAKPSRSLYVCQNCGATASRWAGKCTACGEWNTLVEETDAGPPPGAGVTRQSKGRVIKLE
TLKGEAEEAPRFSSGIAELDRVTGGGIVPGSAILIGGEPGIGKSTLLLQVAAHLARSGGR
AFYFSGEEAIAQVRLRANRLGLADAPVGLASETNLSNILATLGDGKAPDLIIIDSIQTLW
ADTLDAAPGTVSQVRAAALSLIRYGKMAGAAMLLVGHVTKDGQIAGPKVIEHMVDTVLYF
EGDRGMPYRILRAVKNRFGPSDEIGVFEMVSGGLQEVANPSELFLGDRDSRSPGSAIFAG
VEGTRPLLVEIQALVAPSGFGTPRRAVVGWDSNRLAMLLAVLDARCGVSFANHDVYLNVA
GGLKITEPAADLAAAAALLSSISGIALPRDAVYFGEVSLSGAVRAAAMMTPRLKEASKLG
FGQAVLPENGDVDVQGMKLSLSRIAHLKSLADATASCD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagccctcgcgctccctttatgtctgccagaattgcggagcgactgcgtcgcgc
tgggcgggaaagtgcaccgcctgcggtgaatggaacacgctcgttgaagagacggacgca
ggtccgccgcccggcgcaggcgtcacgcgtcagagcaaaggccgcgtcatcaagctcgaa
acgctgaagggcgaagctgaagaagcgccgcgcttttccagcggcatcgccgagcttgat
cgcgtgacgggcggcggcatcgttccgggctcggccattctcatcggtggcgaaccaggc
atcggcaaatcgacgcttctgctccaggtcgcagcccacctcgcccgcagcggcggccgc
gcgttctatttttccggcgaagaagccattgctcaggtccgtctgcgtgcgaaccgcctc
ggccttgctgacgcgcccgtgggcctcgcatccgagacgaacctgtcgaacatcctggcg
acgctaggtgacggcaaggcgccggatctcatcatcatcgattccatccagacgctctgg
gccgatacgctcgatgctgcgcctggcaccgtcagccaggtccgcgccgcagcgctgtcg
ctgatccgctacggcaagatggcgggagcggccatgctgctcgtcggccacgtgaccaag
gacggccagatcgccgggccgaaagtcatcgagcacatggtcgacaccgtgttgtatttc
gaaggcgatcgcggcatgccctatcgcattctgcgcgccgtgaagaatcgcttcggtcct
tcagacgagatcggtgtgttcgaaatggtcagcggcggcttacaggaagtcgccaatccg
tccgagctgttcctcggcgatcgcgacagccgcagccccggctcggcgatcttcgcaggc
gtcgaaggcacgcgtccgctcctcgtcgagattcaggcgctcgttgcgccgtcgggcttc
ggcaccccgcgccgcgccgtcgtcggctgggatagtaaccgtctcgccatgctgctcgcc
gtgctcgatgcccgctgcggtgtttcattcgccaaccatgacgtttacctaaacgtcgct
ggcggactgaagattaccgaaccggccgccgacctcgccgccgccgcggcgcttttgtca
tccatctccggcattgccttgccgcgcgacgccgtctatttcggcgaggtctcgctgtcg
ggggccgtccgcgctgccgccatgatgacaccacgcctgaaagaggcctcaaaacttgga
tttggacaggcggttctgccggaaaacggcgacgtcgatgtccagggcatgaagctgtcg
ctttcccgcatcgcacacctcaagtcgcttgcagacgctactgcgtcatgcgactga
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