Hyphomicrobium sp. MC1: HYPMC_2133
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Entry
HYPMC_2133 CDS
T01557
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00220
Arginine biosynthesis
hmc00240
Pyrimidine metabolism
hmc00250
Alanine, aspartate and glutamate metabolism
hmc01100
Metabolic pathways
hmc01110
Biosynthesis of secondary metabolites
hmc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HYPMC_2133 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HYPMC_2133 (carB)
00220 Arginine biosynthesis
HYPMC_2133 (carB)
Enzymes [BR:
hmc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
HYPMC_2133 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
GARS_A
Dala_Dala_lig_C
ATP-grasp_5
RimK
ATP-grasp_2
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
CCB65355
UniProt:
F8JEE6
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All DBs
Position
complement(2014191..2017466)
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AA seq
1091 aa
AA seq
DB search
MPKRTDIKSILIIGAGPIVIGQACEFDYSGTQACKALRDEGYRIILVNSNPATIMTDPDL
ADATYIEPITPEVVAKIIAKEKPDAILPTMGGQTALNTALALHKQGILHRYGVELIGAKA
EAIDKAEDRKLFREAMEEIGLETPRSRLVHNRDEAASAIEHVGLPAIIRPSFTLGGTGGG
IAYNREEYFEIIDRGLDASPTSQVLVEESVIGWKEYEMEVVRDKADNCIIICSIENIDPM
GVHTGDSITVAPALTLTDKEYQIMRDASIAVLREIGVETGGSNVQFAVNPADGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIQNEITGGATPASFEPTIDYVVTKIP
RFAFEKFLGADTTLTTSMKSVGEAMAIGRTFAESMQKALRSMETGLTGFDDIQLEGLGQG
DDKNVVRAAVSRPTSDRILKVAQAFREGFSLDEIHQYCKIDPWFLSQIKAITDTEARIIA
HGLPKTAPQLRALKAQGFSDARLAKLGKVSETDVRKLRKDLGVTPVFKRIDTCAAEFASP
TAYMYSTYETGLSGDPVCEADPSAKDKVVILGGGPNRIGQGIEFDYCCCHACFALTAADF
ETIMVNCNPETVSTDYDTSDRLFFEPLTAEDVLEIIRVESRKGSLKGVIVQFGGQTPLKL
ASALEEAGVPILGTSPDAIDLAEDRDRFKALIDKLNLKQPKSGIAKTPEAARGIAEEIGY
PVVIRPSYVLGGRAMEIVHDGAEVDRYVARLSATLDRPSELVVSDKRPLLIDSYLTDAVE
VDVDCLSDGKDTFVAGIMEHIEEAGIHSGDSACSLPPHSLSTTIVAELERQARELALALR
VVGLMNVQFAIKDEQVFILEVNPRASRTVPFVAKVIGLPIASIAAEVMAGKPLADFKLAK
PTYTHIAVKEAVFPFARFLGVDPILGPEMRSTGEVMGIDHDFAMAFGKSQLGAGQKLPSK
GTVFVSVKESDKSRVVAPVRELAAMGFKVVATRGTKRFLEANGIQCDAINKVLEGRPHIV
DAIKNGDINLVFNTTEGSKALSDSKDIRRTALLHHIPYYTTLAGAVAVTRAIKALASDTL
DVAPLQAFAHR
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgcactgacatcaaatccattcttatcatcggcgcaggcccgatcgtcatc
ggccaggcgtgcgagttcgactattccggcacgcaggcctgcaaggcgctgcgcgacgag
ggctatcggatcatcctggtcaattccaatccggcgaccatcatgaccgatccggacctc
gccgatgcaacctacatcgagccgatcacgcccgaagtcgtggccaagatcatcgccaag
gaaaagcccgacgccatcttgccgacgatgggcggccagaccgcactcaacaccgcgctg
gcgctgcacaagcaaggcattctgcatcgctacggcgtcgagttgatcggtgccaaggct
gaggccatcgacaaggccgaggaccgcaagctgttccgcgaggcgatggaagagatcggg
ctcgaaacgccgcgctcccgtctggtgcacaatcgcgacgaggcggcgtccgccattgag
cacgtcggcctgccggcgatcatccgtccgtcgttcacgctcggcggtacgggcggcggc
atcgcctacaatcgcgaggaatatttcgagattatcgaccgcggccttgatgcctcgccg
acgtcccaggtcctcgtcgaggaaagcgtcatcggctggaaagagtacgagatggaggtc
gtccgcgacaaggcggacaactgcatcatcatctgctcgatcgaaaacatcgacccgatg
ggcgtgcacaccggcgacagcatcaccgtcgcaccggcactgacgctgacggataaagaa
tatcagatcatgcgcgacgcctcgattgccgtcctgcgcgagatcggtgttgagacgggc
ggctcgaatgttcagttcgcggtcaatccggcagacggccgcctgatcgtcatcgagatg
aacccgcgcgtgtcgcgctcgtctgcgttggcttcgaaggcgacgggcttcccgatcgcg
aaggtcgcggcgaagctcgccgtcggctacacgctcgacgaaattcagaacgagatcacc
ggcggcgccacgcccgcgtcgttcgagccgacgattgattacgtcgtcacgaaaattccc
cgcttcgcgttcgagaaattcctcggtgccgacacgacgctgactacgtcgatgaagtcg
gtgggcgaagccatggccatcggccggacgttcgccgagagcatgcagaaagcgctgcgc
tcgatggagacgggcctgaccggcttcgacgacatccagctcgaaggcctagggcagggc
gacgacaagaacgtcgtccgcgccgccgtctcgcgccccacctccgaccgcattctgaaa
gtcgcgcaggccttccgcgaaggcttctcgctcgacgagatccatcagtattgcaaaatc
gacccgtggttcctcagccagattaaggcgatcaccgacaccgaagcgcgcatcatcgcg
cacggcctgccgaagactgcgccgcagctgcgtgcgctgaaggcgcaaggcttctccgat
gcgcgcttggcgaagctcggaaaggtcagcgagaccgatgtccgcaagctgcgcaaggat
ctgggcgtcacgcccgtattcaagcgcattgatacgtgtgctgccgaatttgcatcgccc
acggcctatatgtattcgacttacgaaaccggcctcagcggcgatcccgtctgcgaagcc
gatccgagcgcaaaggataaagtcgtcatccttggcggaggcccgaaccgcatcggccag
ggcatcgaattcgactactgctgctgccacgcctgcttcgcgctgacggccgccgacttc
gaaacgatcatggtcaactgcaatcccgagaccgtttcgaccgactatgacacgtccgac
cggctgttcttcgaaccgctgaccgccgaagacgtgctcgaaatcatccgcgtcgaaagc
cgaaaaggctcgctgaagggcgtcatcgtgcagttcggcggccagacgccgctgaagctc
gccagcgcgctggaagaggcaggggttccgatcctcggcacgtcgcccgacgccatcgat
ctcgccgaagaccgcgaccggttcaaagcgttgatcgataagctcaacctcaagcagccc
aagagcggcatcgccaagacgccggaagccgcccgcggcattgccgaagaaattggctat
cccgtcgtcatccgtccgtcctacgtgctcggcggccgcgcgatggagatcgtacacgac
ggcgccgaagtcgaccgttacgtcgcgcgcctgtcggcaacgctcgataggccgtcggaa
ctcgtcgtctccgacaagcgcccgctgctgattgacagctatctgaccgacgctgtcgaa
gtcgatgtcgattgcctgtccgacggcaaggatacgttcgtcgccggtatcatggagcat
atcgaggaagcgggcatccactccggcgacagcgcctgctcgctgccgccacactcgctc
tcgacgaccatcgtcgccgagcttgaacgccaagcccgcgagctcgctctggcgctccgc
gttgtgggtctgatgaacgtgcagttcgccatcaaggacgaacaggtctttattctcgaa
gtgaatccgcgcgcgtctcgcacggtgccgttcgtcgcgaaagtcatcggcctgccgatc
gcctcgatcgcggccgaagtcatggctggcaaaccgctcgcagatttcaaactcgcgaaa
ccgacctacacgcatattgcggtcaaagaggcggttttcccgttcgcgcgttttctcggt
gtcgatcctattttgggacctgagatgcgctcgacgggcgaagtcatgggcatcgaccac
gacttcgcgatggccttcggcaagagccagctcggcgccgggcagaaactcccgtccaag
ggcacggtgttcgtctcggtcaaagaaagcgataaatcccgcgtcgtggccccggtccgg
gagctggccgccatgggcttcaaggtcgtcgcgacccgcggaaccaagcgcttcctggaa
gcgaacggcatccagtgcgatgccatcaacaaggttctggaaggccgtccgcacatcgta
gacgccatcaaaaatggcgatatcaacctcgtttttaatacaaccgagggttcgaaagct
ctgagcgatagcaaggacatccggcgcacggccttgcttcaccacatcccctactataca
acattggcgggggcggtagcggttacacgggctatcaaagcactggcatcggacaccctg
gacgtggctccgttgcaggctttcgcgcatcgctaa
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