Hyphomicrobium sp. MC1: HYPMC_2429
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Entry
HYPMC_2429 CDS
T01557
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hmc01002
]
HYPMC_2429
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
HYPMC_2429
Peptidases and inhibitors [BR:
hmc01002
]
Cysteine peptidases
Family C82
HYPMC_2429
Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HYPMC_2429
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Cas_Csx9
Glyco_transf_52
Motif
Other DBs
NCBI-ProteinID:
CCB65646
UniProt:
F8JHJ6
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All DBs
Position
complement(2298366..2300273)
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AA seq
635 aa
AA seq
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MTLSPRGPHVLSKSWSGRSLIGSHVRPFMICGALAVVQIPGLAIAEDAAPPPNVPNIEAA
QAISTPPAETPAPLTGVPAALCTKLSTTLAFDTSDRAAVVSFYQGRQCRPLWVDDKGLTH
AADLAIAELGRAGEWGLDASDFNVTAATKMLGDGQSSPEELAAADIAITGAILRYAHQAE
GARIPDPEKQLSYYLDRKPVITPASGVLAQIADRPDPDAVLRGFQPQQDQFLKLKALLAS
LRGEHESKPVVPQIPKRGAMLANGVRSPDVAILKQRFAIATSGDDASLFNDALETAIKQF
QEQNGLAADGFVGPATRTALAGDDTKSAADKIEAVIANMEEWRWMPRSLGDTHILVNVPS
FSIALTEDGKTLFSDRVVVGTADKETPIFSKDMTTIVLNPRWNIPDSIKLSMLLSGRSIE
SQGYVVMRNGRRIDSTKVNWAKANLSAYNFYQPAGDDNALGVVKLLFPNKHSVYLHDTPS
KYLFDKPVRLYSHGCMRVRNPQVFAQTILDIDRGDAAPNVKQLIQRGPMDNEVKLERPIP
VHVGYFTVWVDDGGKAHYYDDWYGHQKRIEQALAGKWDAIDVATAPPLDTAALKAVRFTR
SSDRLTPPMGLTNSGGSYRKYDGGVGDIIRQVLGF
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgtccccccgcggccctcacgttctatccaagtcctggagcggccggtcgctc
atcgggtcgcacgtcaggccgttcatgatatgcggcgcccttgccgtcgtgcagatccct
gggctcgccattgccgaggatgccgcgccgccccccaacgttccgaacatcgaagccgcg
caagccatttcgacaccgcccgcggaaacgccagctcccctgaccggtgtcccagcggcg
ctttgcaccaagctttcgaccacgctggccttcgatacaagcgaccgcgccgccgtcgtc
tcattctatcaaggtcggcaatgccgaccgctgtgggtcgacgataagggactgacgcac
gccgctgacctcgcgatcgccgaattgggccgcgctggcgaatggggtctcgacgcctcc
gatttcaacgtcactgccgctacgaaaatgctcggtgacggacaatcctcgcccgaagaa
ctcgctgcagccgacattgcaatcaccggtgcaattctgcgctacgcccatcaggccgaa
ggcgcacgcattccggaccccgaaaagcagctttcctattatctcgatcgcaagccggtc
attacgccagcctccggcgttctggcacagattgctgacaggcccgaccctgatgcagtg
ctgcggggtttccagccccagcaggatcagttcctgaagctgaaagctctgctcgccagc
ctgcgcggcgagcatgaaagcaagccggtcgtgccgcaaattccgaagcgcggcgcaatg
ctcgcgaatggcgttcgctcgcccgacgtcgcaatattgaagcagcgctttgcgattgca
acgtcaggcgacgatgcttcgctgttcaacgatgcgctcgaaacggcgatcaagcaattt
caggaacagaacggcctcgccgccgacggtttcgtaggtcctgcgacacgcacggcgctg
gctggtgacgatacgaaatcggcagccgacaagatcgaagccgtcattgccaatatggaa
gagtggcgctggatgccgcgctctctcggcgatacgcacatcctggtcaacgtgccctca
ttctcaattgcactgacagaagacggtaagacgctgttcagcgatcgcgtcgtcgtcggc
accgccgacaaggagaccccgatcttctccaaggatatgacgacaatcgtcctcaatccg
cgctggaacatcccggattcgatcaagctctctatgctgctgtcaggccgctccatcgag
agccaggggtatgtcgtcatgcgaaacggccgccgcatcgacagcaccaaggtcaactgg
gcgaaagccaacttgagtgcctacaacttctatcagcccgcaggcgacgacaacgcgctc
ggcgtcgtgaagctgctctttccgaacaagcactcggtctacctgcacgacacgccgtcg
aaatatctcttcgacaagcccgtcaggctctacagccacggctgcatgcgtgtacgcaat
ccgcaggtcttcgcccagaccatcctggacatcgataggggcgacgccgcgcccaacgtg
aaacagctcattcagcgcggtccgatggacaacgaggtcaagctcgaaaggcctattccc
gtccacgtcggctatttcacggtctgggtcgatgatggcggcaaggcccactactacgac
gattggtacggccatcaaaagcgcatcgagcaggcgcttgcgggcaagtgggacgcaatc
gacgttgcgacggcgccgccgctcgataccgcggcattgaaagcggtgcgcttcactcgc
agcagcgaccgtctcaccccgccgatgggcctgaccaatagcggcggcagctatcgcaag
tacgatggcggcgtcggcgatatcattcgccaggtgcttggcttctaa
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