Hyphomicrobium sp. MC1: HYPMC_2455
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Entry
HYPMC_2455 CDS
T01557
Name
(GenBank) Uracil-DNA glycosylase superfamily protein (DNA replication, recombination and repair) (fragment)
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HYPMC_2455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmc03400
]
HYPMC_2455
Enzymes [BR:
hmc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HYPMC_2455
DNA repair and recombination proteins [BR:
hmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HYPMC_2455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CCB65672
LinkDB
All DBs
Position
2323405..2324082
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AA seq
225 aa
AA seq
DB search
MPKEASKPSVRKRASPSPSTGDLFEPTVGNEPRTLAELNEDMAAAGPMVEGGTRAVFGEG
PIGAALAFVGEQPGDQEDLEGHPFVGPAGKLLDKALGEAGIDRAQSYVTNAVKHFKFQQR
GKRRLHEKPTMGEVKHYRWWLMKELDFVHPHLVVALGGTAAYALAGAPVVIGRSRGPADF
GTMAGFITVHPSSILRIRDHDEKESAYADFVHDLKSARKLVARHT
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggaagcttccaaaccgtctgtgcgcaagcgcgcttcgccgagtccctcgacc
ggcgatctctttgagcctacggtcgggaacgagcctcgcactctcgccgaactcaacgaa
gatatggcggccgctggcccaatggtcgagggtggaacgcgcgccgtcttcggcgagggg
ccgattggagcagcgcttgcgttcgtcggtgaacagccgggcgaccaggaagatctcgaa
ggccatccgttcgtcggaccggcaggcaagctgctcgataaagcgctcggtgaagccgga
atagatcgcgcgcaatcttacgtcacgaatgcggtaaagcacttcaagtttcagcagcgc
ggcaagcgacgccttcacgagaagccgacgatgggagaagtgaagcactatcgctggtgg
ctgatgaaggagctggacttcgtccacccgcatctcgtcgtagcgcttggcgggactgcc
gcatatgcgctggccggtgcgcccgtggttatcgggcgctcacgtggaccggcagacttc
gggacgatggctggcttcatcaccgtgcatccgtcttcgatcctgcgtattcgcgatcac
gatgagaaagagtcagcctacgccgatttcgtgcatgatttgaaaagcgcgcgaaagctt
gtcgcccggcatacctga
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