Hyphomicrobium sp. MC1: HYPMC_2676
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Entry
HYPMC_2676 CDS
T01557
Name
(GenBank) putative protein-export membrane protein, SecD/SecF family
KO
K12257
SecD/SecF fusion protein
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc02024
Quorum sensing
hmc03060
Protein export
hmc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HYPMC_2676
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HYPMC_2676
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HYPMC_2676
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hmc02044
]
HYPMC_2676
Secretion system [BR:
hmc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HYPMC_2676
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecDF_P1_head
SecD_1st
SecD_SecF_C
ACR_tran
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
CCB65893
UniProt:
F8J668
LinkDB
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Position
complement(2519197..2520819)
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AA seq
540 aa
AA seq
DB search
MLHFTRTKVFLILLTCLAGILVAMPNLFSKETVASWPWYIPHKQMPLGLDLQGGAHLLLE
MDQNEIKKDWLNNLRDESRKVLRDARIGFTGIGAQGSQLVVKLAKPDERDKAIKELYKVR
QTIGSAVLGTGGYDVDVSEGNDPGTIIIKPTEAGLRARLSNAAAASIETINRRVNNLGTS
ESTIVRQGTDRILIQFPGLKDTKELKALIGETAKLTFHEVNPSMSADEAQQTSIPTGYKI
YPADKDDGGPRSYLLRETPVVQGEDLADAQPGFDSRTGEPVINFRFNQVGARKFANFTKD
NVGRPFAIVLDDKVLSAPVIREPILGGSGQISGNFTVESSTRLAVQLRSGSLPTKLTIVE
ERTVGPSLGADSIADGKLAGTIGGIAVVILTVLAYGTFGIFACVGLIVHLIMTVALMTLI
GSTLTLPGIAGLVLGVAMAVDANVLIYERIREELRTGKTPVAGIDAGFQRAFVTIADSQL
TTLACAIIMFWLGSGPIRGFAVTLTIGILTSIFASVTVVRMLIWFWLRAQPKGRIQTVPV
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgctgcactttacccgcaccaaagtttttctcatcctgctgacctgtctcgccgggatc
ttggtcgcgatgccgaacctcttctcgaaagagacggttgcgtcgtggccctggtatatc
ccgcataagcagatgcctctcggccttgacctacaaggcggcgcgcacttgctgcttgag
atggatcagaacgaaatcaagaaagattggctgaacaatctccgggatgaatcgcgcaaa
gtgctgcgtgacgcgcggatcgggttcaccggcattggcgctcagggttcacagctcgtc
gtgaagcttgcaaagcctgacgagcgcgacaaggcgatcaaggaactctacaaggtccgc
cagacgatcggcagcgccgtgctcggaaccggcggctacgatgttgatgtcagcgaaggc
aacgatcccggcacgatcattatcaagccgaccgaagccggtttgcgcgcccgcctttcg
aatgctgccgctgcgtcgatcgaaacgatcaaccgtcgcgtgaacaatctcggcacctcg
gaatcgaccattgtccggcagggtaccgatcgtattttgatccagttccccggtctgaaa
gacaccaaagaactgaaagcgcttatcggtgaaactgcgaagctgacgttccacgaagtc
aatccgtcgatgtccgctgacgaagcccagcagaccagcattccgacgggctataagatt
tatcccgccgacaaggacgacggcggtccgcgttcctatttgttgcgcgaaacgccggtg
gtgcagggtgaagacctcgccgacgcccagccgggcttcgacagccgcaccggcgaaccc
gtcatcaacttccgcttcaatcaggttggcgcgcgtaagtttgcgaacttcacgaaagac
aatgtcggccgtccgttcgccatcgtgctcgacgacaaggttctctctgcgccagtcatt
cgcgagccgattctcggtggttccggccagatttccggtaatttcaccgtcgaaagttcg
acccgtctcgccgttcagctccgctcgggttcgctgcccacgaagttgaccatcgttgaa
gaacgcacggtcggcccgtcgctcggcgctgactccattgccgatggtaagctggcaggt
acgatcggcggtatcgcggtcgttattctgaccgttcttgcgtacgggacgttcggtatt
ttcgcctgtgtcggcctcatcgtgcatttgatcatgacggtggcgttgatgacgctcatt
ggctcgacgctgacgttgcccggcatcgctggtctcgttcttggcgtcgcgatggccgtc
gacgctaacgttctgatctatgagcgtatccgcgaagaactgcgcaccggcaagacgccg
gttgcaggcatcgacgccggcttccagcgcgccttcgtgacgatcgccgatagccagctg
acgacgctggcttgcgccatcatcatgttctggctcggctccggtccgatccgcggcttc
gccgtcacgcttacaatcggcattctgacttcgatcttcgcgtctgtgacggtcgtgcga
atgctcatctggttctggctcagggcccagcccaagggccgcattcagaccgttccggtc
tag
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