Hyphomicrobium sp. MC1: HYPMC_2776
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Entry
HYPMC_2776 CDS
T01557
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00260
Glycine, serine and threonine metabolism
hmc00460
Cyanoamino acid metabolism
hmc00630
Glyoxylate and dicarboxylate metabolism
hmc00670
One carbon pool by folate
hmc00680
Methane metabolism
hmc01100
Metabolic pathways
hmc01110
Biosynthesis of secondary metabolites
hmc01120
Microbial metabolism in diverse environments
hmc01200
Carbon metabolism
hmc01230
Biosynthesis of amino acids
hmc01240
Biosynthesis of cofactors
hmc04981
Folate transport and metabolism
Module
hmc_M00140
C1-unit interconversion, prokaryotes
hmc_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HYPMC_2776 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HYPMC_2776 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HYPMC_2776 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HYPMC_2776 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HYPMC_2776 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HYPMC_2776 (glyA)
Enzymes [BR:
hmc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HYPMC_2776 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CCB65993
UniProt:
F8J775
LinkDB
All DBs
Position
complement(2625603..2626907)
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AA seq
434 aa
AA seq
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MSTAPAAANSQTSRFFKAHLSETDPEVFSAIQKEFGRQQHEIELIASENIVSQAVLDAAG
SVLTNKYAEGYPGKRYYGGCQYVDIAEELAIDRAKKLFNCGFANVQPNSGSQANQGVFNA
LAKPGDTILGLSLAAGGHLTHGAPVNQSGKWFNAVHYMVKPDTHLIDMDEVKKLAHEHKP
RIIIAGGSAYPRKIDFAAFRAIADEVGATFLVDMAHFAGLVAAGLIPSPFPHAHVVTTTT
HKTLRGPRGGMILTNDEDIAKKINSAIFPGIQGGPLMHVIAAKAVAFGEALRPDYKVYIK
NVMDNAKALGEVMVQNGFALVSGGTDTHLILVDLRPKKITGNKAEKSLGRAHITCNKNGI
PFDPEKPMVTSGIRLGSPAGTTRGFGVAEFQEIGRLISEVLDGLSKNGEEGNAAVEEAVK
AKATELCARFPIYA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgcaccggccgcagcaaactcgcagacgtcgcgcttcttcaaggcgcacctc
tcggagaccgatcccgaggtcttctccgccatccagaaggaattcggacgtcagcagcac
gaaatcgagctgatcgcatctgagaacatcgtgtctcaggctgtgctcgatgctgcaggt
tccgttctgacgaacaagtacgcagaaggctatccgggcaagcgctactacggcggctgc
caatacgtcgatatcgccgaagaactcgcgatcgaccgcgccaagaagctgttcaactgc
ggttttgccaacgttcagccgaattcgggctcgcaggccaaccagggcgtcttcaacgcg
ctggcgaagccgggcgacacgatcctcggcctgtcgctcgctgccggcggacacttgacg
cacggcgcacccgtcaaccagtcgggcaagtggttcaacgctgtccattacatggtgaag
ccggacacgcacctcatcgacatggacgaggtcaagaagcttgcccacgagcacaagccg
cgcatcatcatcgccggcggttcggcctatccgcgcaagatcgacttcgcagcgttccgt
gcgattgccgatgaagtcggcgcgacgttcctcgtcgatatggcccacttcgccggtctc
gtggccgctggccttatcccgagcccgttcccgcacgcccacgtcgtcacgacgacgacg
cacaagacgctgcgcggcccgcgtggcggcatgatcctgacgaacgacgaagatatcgcg
aagaagatcaactcggcgatcttccctggcatccagggtggcccgctgatgcacgtcatc
gctgcgaaggccgtcgctttcggcgaggcgctgcgcccggactacaaggtctacatcaag
aacgtcatggacaacgccaaggctcttggtgaggtcatggtgcagaacggcttcgcgctc
gtctcgggcggcaccgacacgcacctgatcctcgtcgaccttcgtccgaagaagatcacg
ggcaacaaggccgagaagtcgctcggccgcgcgcacatcacctgcaacaagaacggcatt
ccgttcgaccccgagaagccgatggtcacgtcgggcattcgtcttggctcgcctgccggc
accacgcgcggcttcggcgtcgccgagttccaggagatcggacgcctgatctccgaagtt
ctcgatggtctgtcgaagaacggcgaagaaggcaacgcggctgtcgaagaagccgtgaag
gccaaggcgacggagctctgcgcccgtttcccgatctacgcttaa
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