Hyphomicrobium sp. MC1: HYPMC_2778
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Entry
HYPMC_2778 CDS
T01557
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hmc01002
]
HYPMC_2778
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
HYPMC_2778
Peptidases and inhibitors [BR:
hmc01002
]
Cysteine peptidases
Family C82
HYPMC_2778
Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HYPMC_2778
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
CCB65995
UniProt:
F8J777
LinkDB
All DBs
Position
complement(2628573..2629925)
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AA seq
450 aa
AA seq
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MHIGRSTFARAGSTARRIAPLLVGIGFVTLSAAAWTGMGSAAAQSFGWINFGPTGNDAPG
SSLSTNPTDPDFVREWEANPPKGFATLAKANIEATKMAVREYLMIVSRGGWPQLPVPPNK
TPRDSLLQYGTTDPSVPLLRARLAASRDLRSGNTTSTYFDYEVDKALKRFQASNGLTPTG
IADKRTIMALNVPADVRLKQLKANLARLQEVIPTTQKKYVVVNIPAAQIEAVENGQIVAR
YAGVVGKEDRPTPLLRTPITDLSFNPTWRLPPTVIAEDLIPRGQQMQKKGQNVLLKFGID
AYDGSGKKVDPAKIDWDKVKPGTYRYSQKPGKENPLGFLKINFNSAHSVYMHDTPSDRIF
GRNFRSESSGCIRVHNIENLAMWLLAGQNGWNADRIEQMKESGKPMDVRLKKPVQLLFVY
ISAWATADGVVQFRRDIYQKDGVGEIAASY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtgcatatcgggcgatcgacatttgccagggcgggctcaaccgcccgcagaatcgcgcca
ctgctggtcggtatcggtttcgtgacgctttccgccgccgcatggaccggcatgggaagt
gccgccgcccagagcttcggctggatcaatttcggcccgaccggcaacgatgcgccaggt
tcctcgctctcgaccaatccgaccgaccccgatttcgtccgcgagtgggaagccaacccg
ccgaagggcttcgccacgctcgcgaaggcgaacatcgaagcgacgaagatggccgtccgt
gagtatctgatgatcgtcagccggggcggctggccgcagcttccggtgccgccgaacaag
acgccgcgcgatagcctgctgcagtatggcacgaccgatccaagcgtcccgcttctccgg
gcacgccttgcagcgtctcgcgatttgcggagcggcaatacaacttcgacctatttcgat
tacgaggtcgacaaggcgctgaagcggttccaggcgtcgaacgggttgaccccgaccggc
atcgccgacaagcgcacgatcatggcgctgaacgtgcctgccgacgtacgcctaaagcaa
ttgaaggccaatctggcgcgcctccaggaagttatcccgacgacgcagaagaagtacgtc
gtcgtgaacattcctgccgcccaaatcgaagccgtcgagaacggacagattgttgcccgc
tatgccggcgtcgtcggcaaggaagatcgtccgacaccgctgctgcgcacgccgatcacc
gatctgagcttcaatccgacctggcgcctgccgccgacggtcatcgctgaggatctgatt
ccgcgcggtcagcagatgcagaagaagggacagaacgttctgctgaaattcgggatcgac
gcctacgacggcagcggtaagaaagtcgatccggctaaaatcgactgggacaaggtcaag
cccggcacctaccgctatagccagaagcccggcaaggagaacccgctcgggttcctcaag
atcaatttcaacagcgcccactcagtttacatgcacgacaccccgtccgaccgcattttc
gggcggaatttccgatccgaaagctcgggctgcatcagggttcacaacatcgaaaatctg
gcgatgtggttgcttgccggacaaaacggctggaatgccgaccggatcgagcaaatgaaa
gaatcaggcaagccgatggacgtccggctgaaaaaacccgttcagctgctgtttgtttac
attagcgcctgggccacggccgacggggtcgtccagttccgccgcgacatctatcaaaag
gacggcgtcggcgagatcgcggcctcatattag
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