Hyphomicrobium sp. MC1: HYPMC_2915
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Entry
HYPMC_2915 CDS
T01557
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta (NS1) (HU-1)
KO
K03530
DNA-binding protein HU-beta
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmc03032
]
HYPMC_2915 (hupB)
03036 Chromosome and associated proteins [BR:
hmc03036
]
HYPMC_2915 (hupB)
03400 DNA repair and recombination proteins [BR:
hmc03400
]
HYPMC_2915 (hupB)
DNA replication proteins [BR:
hmc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HYPMC_2915 (hupB)
Chromosome and associated proteins [BR:
hmc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HYPMC_2915 (hupB)
DNA repair and recombination proteins [BR:
hmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HYPMC_2915 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
ALOG_dom
HU-CCDC81_bac_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
CCB66132
UniProt:
F8J9D1
LinkDB
All DBs
Position
complement(2777613..2777891)
Genome browser
AA seq
92 aa
AA seq
DB search
MSKKDLIDAVARDCELTKEKASGVVDAVLAHIRAAMKDGHEVRIPDFGTFKVAARKAREG
RNPATGKTIQIPASRVPKFTPAKGLKDALNIN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaaagatttgattgatgccgttgcccgagattgcgagctgacgaaggagaag
gcgagtggcgttgttgatgccgttctcgcccacattcgtgccgcgatgaaggacggccat
gaagtgcgcatcccggatttcggcacgttcaaggtcgctgcccgtaaggcgcgcgaaggc
cgcaatccggcgaccggcaaaacgatccagattccggcttcacgcgtgccgaagttcacg
ccggccaagggcctgaaagacgcgctgaacatcaactaa
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