Hyphomicrobium sp. MC1: HYPMC_3082
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Entry
HYPMC_3082 CDS
T01557
Name
(GenBank) Amino acid permease-associated region
KO
K20265
glutamate:GABA antiporter
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HYPMC_3082
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hmc02000
]
HYPMC_3082
Transporters [BR:
hmc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HYPMC_3082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AA_permease_2
AA_permease
DUF2953
Motif
Other DBs
NCBI-ProteinID:
CCB66299
LinkDB
All DBs
Position
complement(2945758..2947182)
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AA seq
474 aa
AA seq
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MAVSAPGAVRPPRFQKVLHGLDMTLFTVCAVLVIDQLTAAASIGVQSIFWWIFTLVLFFI
PYGLITAELGSTYTEEGGIYAWVRRAFGPVWAGRTAWLWWVNVAFWMPSVYILFAGILAE
LIAPDMSLWTKIVITLGLTWLTVGINIITLEVGKWVPNIGAIFKVIIMLALGLGGIAYAM
HNGPANEFSLATLTPHWGDSLAFLPVIIYNFLGFELMSGAAEEMENPGRDVPWAIVRSGS
IIAFFYILATVGILLALPLSDIGLIKGLPDTFQKIFGAGISGNVPVIALCVMTLYTLIAN
MTTWSIGANRSAAEAANRGDLPSIFAKLHPVYKTPANSAILCGVIASVVLLIYGWLAKSS
EDLFWTTFAFSSVVFLLPYFLLFLSFLKLRRDDPDIRRPYRVPGGYPVAVLLSSICMLFI
LQAIVFFIYKPGAVDMTYIGAVLGGVVLTVIVGEFLVHGKRPEPAKPTKEIAHV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctcagccccgggtgcagtgcggcctccgcgcttccaaaaagttctccacggc
ttggatatgaccttgtttaccgtctgtgcggtactcgtcattgatcagctgacggcagcc
gcctcgatcggcgtgcaatcgatcttctggtggatattcacgctcgtcctgttcttcatt
ccgtatggtctgatcactgctgagcttggcagcacctacacggaggagggcggcatctat
gcctgggttcgccgcgccttcggacccgtctgggctggacgtaccgcttggctctggtgg
gtcaacgtcgccttctggatgccgtcggtgtacatcctctttgcaggcattctggcagaa
ttgattgcgccggatatgagcctgtggacgaagattgtcatcacgctggggctgacgtgg
ctcaccgtcggcatcaatatcatcaccttggaggtcgggaaatgggtgccgaatatcggc
gccattttcaaagtgattatcatgctcgcgctcggcctcggcggcattgcctacgcaatg
cataacggtcccgcgaacgagttcagcctcgcgacgctcacgccgcactggggcgatagt
ctcgcgttccttccggtcattatctataatttcctcggcttcgagctaatgtccggagcg
gctgaggagatggaaaatcctgggcgggacgtgccgtgggcaatcgtacgctcggggtcg
atcatcgcgttcttctacattctggcaaccgtcggcattctgctcgcgctcccgctttcc
gacatcggcctcattaagggcctgccggatacgtttcaaaagatcttcggcgcaggcatc
tccggcaatgttccggtcatcgccctgtgcgtgatgacgctctatacattgatcgccaac
atgacgacgtggtcgatcggagcaaaccgatcggccgccgaggcggccaatcgtggcgat
cttccgtcgatcttcgccaagcttcatcccgtttataagacacccgctaactcggctatc
ctgtgcggtgtcatcgccagcgtcgtgttgttgatttacgggtggctcgcaaaaagctcc
gaagatctcttctggacgaccttcgcgttctcgtcagtcgtcttcctgcttccctacttc
ctgctgttcctctcgttcctgaaactacgtagggatgacccagatattcgacgtccttat
cgcgttcccggcggctatccggttgctgtgctgctgagcagcatctgcatgctcttcatc
ctgcaggctatcgtcttcttcatctacaagcccggcgcggttgatatgacctacataggc
gccgtgctcggaggcgtcgtgctcacggtcatcgtcggcgaattcctcgtccatggcaaa
cgtcccgaaccagcaaaaccgacgaaggagatcgcccatgtctaa
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