Hyphomicrobium sp. MC1: HYPMC_3178
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Entry
HYPMC_3178 CDS
T01557
Name
(GenBank) DNA polymerase III chi subunit HolC
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc03030
DNA replication
hmc03430
Mismatch repair
hmc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYPMC_3178
03430 Mismatch repair
HYPMC_3178
03440 Homologous recombination
HYPMC_3178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmc03032
]
HYPMC_3178
03400 DNA repair and recombination proteins [BR:
hmc03400
]
HYPMC_3178
Enzymes [BR:
hmc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYPMC_3178
DNA replication proteins [BR:
hmc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYPMC_3178
DNA repair and recombination proteins [BR:
hmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYPMC_3178
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_chi
DUF5066
Motif
Other DBs
NCBI-ProteinID:
CCB66393
LinkDB
All DBs
Position
complement(3046639..3047085)
Genome browser
AA seq
148 aa
AA seq
DB search
MDVFFYHLEHQPLDRVLPSLLEKTLARGWRAVVQVGNEERLEAIDHMLWTYTDDSFLPHG
TARIGHSGDQPVYLTTTDETPNGAGVRFLVDGAEAREFAGAERFVYVFDGNDADAVALAR
SQWKAAKAAGCAVTYWQQSQSGRWEQKA
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttttttctaccacctcgaacatcagccgcttgatcgtgtgctgccgagcctt
ctggagaagactctggcgcgcggttggcgtgccgtcgtccaagttggaaacgaagagcgc
ctggaagctatcgaccatatgctttggacctacaccgacgacagcttcctgccccacggc
accgcacgcatcggccattccggcgatcagcccgtctatctgacgacgaccgacgagacg
cccaacggcgcgggcgttcgttttcttgtcgatggcgccgaggcgcgcgaatttgcgggc
gcggaacgcttcgtctacgtcttcgacggaaatgatgcggacgccgtcgccctggcgcgc
agtcagtggaaagcagcgaaagcagcgggttgcgctgtcacctattggcagcagtcgcaa
agcgggcgatgggagcagaaggcgtga
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