Hyphomicrobium sp. MC1: HYPMC_3627
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Entry
HYPMC_3627 CDS
T01557
Name
(GenBank) putative Folate-binding protein YgfZ
KO
K06980
tRNA-modifying protein YgfZ
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmc03016
]
HYPMC_3627
Transfer RNA biogenesis [BR:
hmc03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
HYPMC_3627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_CAF17_C
GCV_T
Motif
Other DBs
NCBI-ProteinID:
CCB66837
LinkDB
All DBs
Position
complement(3478960..3479871)
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AA seq
303 aa
AA seq
DB search
MSDIAKAAILHDRSVLEIGGADRTKFLQGLVTNDMRRVAPGTALYTGLLTGQGKLICDLF
IMPDGEKLLVDIASSHVEKFIERLVKFKLRAEVTFGETETPLAVAAVWGSDVAARLGLDP
RTMLTEKNSLPWTHHAFIDPRLPALGARLLFPVDLTVDIELARRGVTSATVEEYNAHRLA
LGVADTADIEGEICYPLEANFELLHGVDFKKGCYVGQELTARMKLKDKLRKRVLPVVSVA
STSLPAVGTSVTANGAELGQLIAVSGLRGLALLRLDRLADAQMDAIRAGEVPLNINWPSW
IPR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatcgcaaaggctgcaattttacacgatcgtagcgtcctcgaaatcggcggc
gcggatcggaccaaatttctccaggggctcgtgaccaatgacatgcgccgcgttgctccg
ggaaccgccctttacaccggcctgctgacaggccaaggcaagctcatttgcgatcttttc
attatgccggatggcgagaagctactcgttgatatcgccagttcgcatgtcgaaaaattc
attgagcgcctcgtcaagtttaagttacgcgcggaggtcacgttcggcgaaacagaaacg
ccgcttgctgtagccgctgtgtggggatcggacgtcgccgcgaggttggggcttgacccg
cgcacgatgttgacagagaaaaattcgcttccttggacacaccacgcattcatagatcct
cgcctcccggctttaggcgcacgcctgctgttccccgtcgatttgacagtcgatatcgag
cttgcccgccgcggcgtcactagcgcaaccgtcgaagaatataatgcgcacagactggca
ctcggcgttgccgacaccgctgacattgaaggagagatttgctacccgctcgaagccaat
ttcgagctgcttcacggtgtcgatttcaagaaaggctgttatgtcggccaagagttgact
gcgcgcatgaagctcaaagacaaattgcgcaagcgcgtattgccagttgtcagcgtggct
tcaacatcccttccggctgtcgggacgtcggtcacggccaatggagccgagcttggacag
ctgattgcagtctcaggcctgagaggcctcgcgttgctccggctcgatcgcctagcagat
gctcagatggatgcgatccgcgctggggaggtgccacttaatatcaattggccgagctgg
attccgcgctga
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