Hyphomicrobium sp. MC1: HYPMC_3697
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Entry
HYPMC_3697 CDS
T01557
Symbol
nifA
Name
(GenBank) Nif-specific regulatory protein
KO
K02584
Nif-specific regulatory protein
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HYPMC_3697 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hmc03000
]
HYPMC_3697 (nifA)
Transcription factors [BR:
hmc03000
]
Prokaryotic type
Helix-turn-helix
Other families
HYPMC_3697 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
AAA_2
AAA
Mg_chelatase
GAF_3
AAA_3
AAA_16
bpMoxR
nSTAND1
DUF473
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CCB66907
LinkDB
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Position
complement(3530537..3532294)
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AA seq
585 aa
AA seq
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MVPMKQTDHIADQPQMPGPKQLSEIALIGIYEVSKILARPARLEITLSSVLNVLSSFLDM
QHGTVVLLDDEDVPDIVVGTSWVEGAAADGLVQLPRRALDQIVATAMPLVIQNTGVHPLF
RHPDRIQDGQTTTKSDSVSFIGVPIKIEDRVVGTLSIDRPWSENAVFRADNDVRFLAMIA
NLIGQTIHLHRVIGRDRERLMDESRRLEKELTSVKPNKLRPRVSGIIGESPPIRALLGKI
EIVAKSNATVLLRGESGTGKELFARAIHELSRRSSGPFIKVNCAALPETVLESELFGHEK
GAFTGAVNSRKGRFELANGGTIFLDEIGEISPSFQAKLLRVLQEGEFDRVGGTKTQKVDV
RIVAATNNDLEEAVTRGTFRADLYYRISVVPLILPSLRERKGDIPLLADTFLSRFNKENG
RTLSLSPSAIDVLTACYFPGNVRELENCICRTATLAAGSAIISEDFACRHDQCLSASLWK
GRDAASSQRHPQMRYMLPILPVRGEVTKVSPADPVPKETVCDPLSEDPNDLSADFPGGRG
PERERLIEAMEKAGWVQAKAARILGLTPRQIGYALKKHGIEIRHF
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctatgaagcaaaccgatcacattgctgatcagccacagatgccagggcccaag
cagctaagcgagattgctctaatcggcatatacgaggtctcgaagatactcgctcggccg
gcgcgtcttgaaataacattatcgagcgtcctcaacgtcctgtcgtcttttttggacatg
cagcacgggaccgttgttttgctcgacgacgaggatgttcctgatatcgtcgttggaacg
agttgggtggaaggagcggcggccgatgggctcgttcaacttccacgaagagcgctcgat
cagatcgtcgcaaccgcgatgccgttggtcattcagaatacaggcgtccatccgcttttc
cgacatccggaccggatccaagacggacagacaactaccaaatccgattccgtttcgttc
attggagttccgataaagatcgaagatagggtcgtcggcacactctccattgatcgtccg
tggtccgaaaacgctgtattccgcgccgataatgatgttcgctttctcgccatgatcgcg
aacctcataggtcagacgatccatctgcatagggtgatcgggcgcgaccgcgagcggttg
atggacgaaagccgaaggctggaaaaagaactcacgagcgtgaagccaaacaagctacgg
ccgcgcgtctccggaattatcggtgaaagtccaccaatccgggcacttcttggaaaaatt
gaaattgtcgcgaaatccaacgcaaccgttcttttgcgtggcgagtccggcaccggcaag
gagttattcgctcgcgcaatacacgagctttctcgccgttccagcggccccttcataaag
gtaaactgcgctgcgttgcccgaaaccgtgcttgaatccgaacttttcgggcatgagaag
ggagcctttacaggcgccgtcaattctcgaaagggccgttttgaactcgcaaatggcggg
acgattttcctcgatgagatcggagaaatatcgccgtccttccaggcgaagctcctgcgc
gtgttgcaggaaggcgaattcgatcgggtcggcggaacgaagacgcagaaagtggacgtg
cgcatcgtcgccgcgacgaacaacgacctcgaggaagccgtcaccagagggacgttccgc
gctgacctctattatcggatcagtgttgttccgcttattttgccgtcgctgcgcgaacgc
aagggtgacatcccgctcttggcggatacgttcctctcgcgtttcaataaggaaaacgga
cggactctatcgctctccccgagcgccatcgacgttctgacagcatgctattttcccggc
aacgtgcgcgagctggaaaattgcatttgccgtaccgcgacgttggcggcgggaagcgcg
atcatcagtgaagatttcgcctgccgtcacgatcagtgtctgtccgcatcgctatggaag
ggccgtgacgcagcatcatcgcaacgtcacccgcaaatgcgatatatgctgccaattcta
ccggtccgtggcgaagtgacgaaggtttcgcccgcggatccggttcccaaggaaaccgtt
tgcgatccgttgagcgaagaccccaacgatctctcggcagatttccccggagggcgcggc
ccggagcgcgagagactaattgaggcgatggagaaagccggctgggtacaggcgaaagcg
gctcgaatcctgggtttgacgcctcgccagatcgggtacgcgctcaagaagcacggcatc
gagatcaggcatttttag
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