Hyphomicrobium sp. MC1: HYPMC_3811
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Entry
HYPMC_3811 CDS
T01557
Symbol
hisS
Name
(GenBank) histidyl-tRNA synthetase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HYPMC_3811 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hmc01007
]
HYPMC_3811 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmc03016
]
HYPMC_3811 (hisS)
Enzymes [BR:
hmc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
HYPMC_3811 (hisS)
Amino acid related enzymes [BR:
hmc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HYPMC_3811 (hisS)
Transfer RNA biogenesis [BR:
hmc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HYPMC_3811 (hisS)
Prokaryotic type
HYPMC_3811 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
CCB67021
UniProt:
F8JIL9
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All DBs
Position
complement(3646159..3647655)
Genome browser
AA seq
498 aa
AA seq
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MSKVNTNTRPKARLAKGFRDIEAPELKALNDMIAKIRDVYERYGFEALETPAIEYTDALG
KFLPDQDRPNAGVFSFQDEDEQWMSLRYDLTAPLARYVAQNFQTLPKPFRRYAFGNVYRN
EKPGPGRFRQFMQFDADTVGAKSVAADAELCMLAADTLEALGLKGKYVIKVNSRKVLDGM
LETVGVDLADDTRRLAVLRSLDKLDKFSKDDVALLLGPGRKDESGDFTKGAGLTKEQIDA
LLDFVSQPALEQDDLGVAAMRTGGFEPSQLYVDGLADLSELKRFVEKAGYEGKIRVPDYS
VVRGLEYYTGPVFEAELTFEIKGDDGKPVRFGSVGGGGRYDDLIARFTGQQVAATGFSIG
VSRLQAALSLINESKTQALGPVVVLVMDKDADAVAGYQEMTQKLRNAGIRSEMYLGNAKS
FGDQIKYADKRNSPCVIIQGSDERAKGEVTIKDLIEGAKAAAAIKDNKEWKEARAAQFSV
SEVHLVQEVYNLIKRHQG
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagtaaataccaacacgcgtcctaaagcgcgcctcgcgaagggttttcgcgat
atcgaagcgcccgagctgaaggcgctcaacgacatgatcgcgaagatccgtgacgtctat
gagcgctatggcttcgaggcgctcgaaacgcctgcgatcgaatataccgacgcgctcggc
aagtttcttcccgaccaggatcgtccgaatgcaggcgtcttctcgtttcaggacgaggac
gagcaatggatgagcctgcgctatgatctcaccgcaccgctcgctcgttatgtggctcag
aatttccagaccctgccgaagccgttccgccgctatgcgttcggcaacgtctatcgcaac
gagaagcccggccccggccgctttcgccagttcatgcagttcgatgccgatacggtggga
gcgaaaagcgtcgcagccgatgccgaactctgcatgctcgctgccgatacgcttgaagca
cttgggctgaagggcaaatacgtcatcaaggtgaacagccgcaaagtgctcgacggtatg
ctggagacggtcggcgttgatcttgccgacgacacgcgccgcttagcagtcctccgttca
cttgataagctcgataaattttctaaggacgacgtcgcgctccttttaggtcctggacgc
aaggacgaatccggcgatttcaccaagggcgctggactgacgaaagaacaaattgatgcg
ctcttggatttcgtgagtcagccggctctcgaacaggatgaccttggcgttgcagcaatg
cgcacaggaggcttcgagccgtcgcagctctacgtcgatggattggccgatctcagcgaa
ctcaagcgcttcgtggagaaagccggatatgagggcaaaattcgcgttcccgattactct
gtcgtccgcgggctcgaatattacaccggccccgtcttcgaggccgagctgacgttcgag
atcaaaggcgacgacggcaaacccgtgcggttcggttctgttggcggcggcggtcgctac
gacgatctcatcgcgcgcttcaccggtcagcaagttgctgccactggcttctccattggc
gtgtcgcgcttgcaggctgcgctgtcgctcatcaacgagagcaagacccaagcgctgggc
ccagtggtcgttctcgtcatggataaggacgccgatgcggtcgccggttatcaagagatg
acgcaaaagctccgcaacgccggtatccgctccgagatgtacctcggaaacgcaaaatca
ttcggcgaccaaattaaatacgccgacaagcgcaacagcccatgcgtcatcatccaaggt
tcggatgagcgcgccaagggcgaggtgacgatcaaggatttgatcgaaggcgcgaaagcc
gctgccgcgatcaaggacaacaaggaatggaaagaggcgcgcgcggctcaattctccgtc
tccgaagtgcacctcgtgcaagaagtttacaacctcatcaagcggcatcagggatga
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