Hyphomicrobium sp. MC1: HYPMC_3823
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Entry
HYPMC_3823 CDS
T01557
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HYPMC_3823 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hmc02000
]
HYPMC_3823 (msbA)
Enzymes [BR:
hmc01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HYPMC_3823 (msbA)
Transporters [BR:
hmc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HYPMC_3823 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
RsgA_GTPase
MMR_HSR1
ABC_ATPase
AAA_30
DUF5906
AAA_21
Zeta_toxin
APS_kinase
AAA_25
nSTAND3
AAA_24
Motif
Other DBs
NCBI-ProteinID:
CCB67033
UniProt:
F8JIN0
LinkDB
All DBs
Position
3659542..3661353
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AA seq
603 aa
AA seq
DB search
MTDLLKKAEKKPRPKLRLDAASRALLARFVRDWVWPRRWQLAWTLFLTTCLAAVTGGYPG
VIKKSFDLLMGGKPGALPYVLVAIVGITLARATLLFLQAVATSRFVLRMTSDMQKMAFRH
LINADFARLSRETPGRLMSRLTNDIGFIQSALTATLNSIFRDTFSVIALVIAMLYLDWAM
TLIVLGVYPLAAIPVASISHRLRRVAKQTQSGLGDMTSLLTEKLSGARLIKSFQLENYAA
DRLDSMFEQIYSLRMKSVRTRARMDPILEVLGGVAIAGVVGFAYLRISQGISSVGDFMGF
VTALMMAAQPIKSLGNLTGRLQEGLAAAESFYGLIDELPSITDKPGAKTLAISKGEIAFR
NVSFAYDKTSEERAVHGFTLDVPGGSTIALVGRSGAGKSTIINLVPRLFDATEGQILIDG
QDVMDVTLKSLRDQIAIVSQDITLFDDTIEANIRLGRLGASEADIIEAAKAAAAHDFIMT
LPDGYKTIIGDRGSRLSGGQRQRLALARAILKNAPILLLDEATSALDNESEQLVQEALAK
FTRSRTTLVIAHRLSTVQNADVICVMDGGRIVERGRHSELIARNGSYARLNRSASGPQAM
IAN
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgacggatctcctgaagaaagccgagaagaaaccgcggccgaagctccggctcgatgcc
gcctcgcgcgcgctgcttgcgcggttcgtgcgcgattgggtatggccgcgtcgctggcag
ctcgcctggacgcttttcctcacgacctgcctcgctgccgtcacaggcggctatccgggc
gtcatcaagaaatcgttcgatctgttgatgggcggcaagcccggcgccctgccctacgtt
ctggttgccatcgtcggaatcacgctcgcgcgtgcgacgttgctgtttctgcaggcggtt
gcgacaagccggttcgtgctgcgcatgacctcggacatgcagaagatggcgttccgtcat
ctcatcaacgccgatttcgcgcgcctctcgcgcgagacgccggggcggcttatgtcgcgg
ctgacgaacgacatcggtttcattcagagcgcgctgacggcgacgctgaactcgatcttc
cgcgatacgttttcggtcatcgcgctcgtcattgcgatgctctatctcgactgggcgatg
acgctcatcgtgttgggcgtctatccgctggccgccattcccgttgcctcgatcagtcat
cggctgcgtcgcgtcgccaagcagacgcaaagtggcctcggcgacatgacatcgctgctg
actgagaagctttccggcgcccggctgatcaaatcgtttcagctcgaaaactatgccgcc
gaccggctcgattcgatgttcgagcagatctattcgctgcggatgaagtccgtccggacg
cgggcgaggatggatccgatccttgaggttctgggcggcgttgcgattgcgggcgtcgtg
ggcttcgcatatttgcgcatttcgcagggcatctcttcggtcggcgatttcatgggtttc
gtgacggcgctaatgatggccgcgcagccgatcaaatcgctcggcaatttaacggggcgc
ctgcaggaaggccttgccgccgcggaaagtttctacggcctcatcgacgaactgccgtcg
atcacggacaagcccggcgcgaagacgcttgctatttcaaaaggcgaaatcgcgttccgc
aacgtctcgttcgcctacgacaagacgtccgaggaacgggccgtgcatgggttcacgctc
gacgtgccgggcggatcgacgatcgcgctcgtgggccgctcgggcgccggaaaatcgacg
atcatcaacctcgtgccccggctctttgacgcgactgaagggcagatcctgatcgacggc
caggacgtcatggatgtcaccctcaaatcgctgcgcgatcagatcgcgatcgtcagtcag
gacatcacgcttttcgacgatacgatcgaagcgaacatccgcctcgggcggctcggcgcg
agcgaggccgatatcattgaagctgcgaaggccgctgccgcgcacgacttcatcatgacg
ctgcccgacggctacaagacgatcatcggcgatcgcggcagccgactttcgggcggacaa
cgtcagcgtttggcgttagcgcgcgcgatcctgaagaatgcgccgatcctgctgctcgac
gaagcgacgagcgcgctcgataacgagagcgagcagctcgtgcaggaagcgctggcgaaa
ttcacccgctcgcgcacgacgctcgtcatcgcgcatcggctttcaacggtacagaatgcc
gacgtcatttgcgtgatggacggcggccgcatcgtcgaacgcggcaggcattcagaattg
attgcgcgaaacggttcttatgcgcggctcaaccgctcggcgagcggtccgcaggcgatg
atcgccaattga
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