Hyphomicrobium sp. MC1: HYPMC_4098
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Entry
HYPMC_4098 CDS
T01557
Name
(GenBank) RND efflux transporter, HME family, translocase subunit
KO
K07788
multidrug efflux pump
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HYPMC_4098
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hmc02000
]
HYPMC_4098
Transporters [BR:
hmc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HYPMC_4098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF5693
Lipoprotein_15
Motif
Other DBs
NCBI-ProteinID:
CCB67307
LinkDB
All DBs
Position
complement(3950275..3953421)
Genome browser
AA seq
1048 aa
AA seq
DB search
MESGGISGPFIRYPIATSLIMVGILFVGVIAFMNLPVAPLPQIDFPTIQVSANLPGASPE
TMASNVAQPLERQFAQIPGVTQTTSTSGLGVTTIVVQFDLDRDIDGAANDIQSAINAAGG
QLPQDLPQPPIYRKVNPADSPILLLSATSDAMPLTEVDDNADTKLAQQISQINGVGQVVI
GGEQKPSIRVQLDPAKLYARGLTLEDVRPPLSITTVNSPKGSVQSANRGYTIYTNDQLTD
AKSWDDVIIAYRNGAPIRIKDVGKAIVGPENDQEAAWANNKRGVFLIIFKEPGANVIETV
DRIKAELPRLQAAMPKALKVHILSDRTQTIRASIEDVEFTLLLSVALVVAVIFVFLRSLW
ATIIPSVTVPLALFGACALMYVLGYSLDNLSLMALTIAVGFVVDDAIVVLENIVRYVEDG
EKPFDAAMKGAREIGFTVVSISISLVAVFIPLLMMGGIIGRLFREFAVTVTMTIAVSGFV
ALTLTPMMASRFLKSEKDVQRGRLYKLSERGFDALLNGYGRGLDFVLRHQFLTLMTFFAT
LGLTAYLFVTIPKGFFPQQDTGLIIGISEAAEDTSFDAMMKYQEEVGKVVSSDPAVATVA
MAIGAGGTTPALNSGRVYITLKPKSERDASAFQVIRRLQPKLAKLEGVRLFMQAAQDVNV
GGRASRTQFQYTLEDADTNELNTWAPRILEKLKTLPTLRDVATDQQMAGTTLKVEVNRDQ
ASRYGLTPDEVDATLYDAFGQRQVAQYFTQQNSYHVIMEASPEVQADPHSLDKLYIHSPT
TGGLIPLGTIASWTTRKTEPLSISHQGQFPAVTISFNLAPGASLGTATNQIRAAERELRL
PASMQTTFQGNAQAFQASLTTIPLLIAAALFVVYLILGILYESYIHPITILSTLPSAGAG
ALITLMLFGFDFSLVAMIGVILLIGIVKKNGIMLVDFAIHAERNEHLSPVEAIRKAALLR
FRPIMMTTLAALLGGVPLMIGAGTGAEIRQPLGYAMVGGLAISQILTLFTTPVIFLYMDR
LSNWLTKPAEDTKAPSDKAGPASAAPAP
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggagagcggcggcatttcaggtccgttcattcgctacccgatcgcgacgtcgctgatc
atggtcggcattctgttcgtcggcgtgatcgcatttatgaatctgccggttgcgccgttg
ccgcaaatcgattttccgaccattcaggtttcggccaatcttccgggtgcgagccccgag
acgatggcgtcgaacgtggcgcagccccttgagcggcaattcgcgcagattcctggcgtg
acgcaaacgacttcgaccagcggcctcggtgtcacgaccatcgtcgtgcagttcgatctc
gatcgcgatatcgacggcgcggccaacgacatccaatctgcgatcaacgccgctggcggt
cagctgccgcaagaccttccgcagccgccgatttatcgcaaggtcaatcccgccgacagt
ccgatcctgctgctttccgccacctccgacgccatgccgctgaccgaggttgacgacaac
gccgatacgaaacttgcgcagcagatcagccagatcaacggcgtcggtcaggtcgtgatc
ggtggcgagcaaaagccttcgatccgcgttcagctcgaccccgcgaagctctatgcccgc
gggctgacgctcgaagatgtgcgaccgccgctctcgatcaccacggtgaacagccctaag
ggctcagtccaatccgccaatcgcggctatacgatctacaccaacgatcagctgactgac
gcgaagtcctgggacgacgtcatcatcgcctaccgcaacggcgccccgatccgcatcaag
gacgtcggcaaggcaatcgttgggccggaaaacgatcaggaagcggcgtgggccaacaac
aagcgcggcgtcttcctgattatcttcaaggagccgggcgccaacgtcatcgagacagtc
gatcgcatcaaggccgagctgccgcggcttcaggcggcgatgcccaaggcgctcaaggtg
catattctgagcgatcgcacgcagacgattcgcgcgtccatcgaggacgtcgaattcaca
ctgctgctctcggtggcgctcgttgtcgccgttatttttgttttcctgcgcagtctctgg
gcgacgatcattcccagcgtgacggtaccgctggcgctgttcggtgcctgcgcgctgatg
tatgtcttgggctatagccttgataacttgtcgctcatggccctgacgatcgccgtcggc
ttcgtcgtcgatgacgccatcgtcgttcttgaaaacatcgtgcgctacgtcgaagacggc
gaaaagccgttcgatgcggcgatgaagggggcgcgcgaaatcggcttcaccgtcgtctcg
atcagcatttcgctcgtcgccgtcttcatcccgttgctgatgatgggcggcatcatcggc
cgcctgttccgcgaatttgcggtcaccgtcacaatgacgattgccgtctcgggcttcgtc
gcgctgacgctgacgccgatgatggcctcgcgcttcctgaaaagcgaaaaggacgtgcag
cgcggccgcctttacaaactgagcgaacgcggcttcgacgcgctgctcaatggctacggc
cgcggcctcgatttcgttcttcgccatcagttcctgacgctgatgacattcttcgcgaca
ttgggattgaccgcttatctcttcgtcaccatcccgaaaggcttcttcccgcagcaggat
accggcctcattatcggcatctccgaagcggccgaagacacctcattcgacgccatgatg
aagtatcaggaggaagtcggcaaagttgtttccagcgatccggccgtcgcgacggtggca
atggcgatcggagccggcggcacgacgcctgcgctcaacagcggccgcgtctatatcaca
ttgaaacccaagtccgagcgcgatgcgtcggcattccaggtcatccgccgtttgcagccg
aagctcgcaaagctcgaaggcgttcgcctcttcatgcaggcggcgcaggatgtgaatgtc
ggcggccgcgcgtcgcgcacgcaattccagtacacgcttgaggacgccgacaccaacgag
cttaatacctgggcgccgcgaatcctcgaaaaactgaagacgctgccgacgctccgcgac
gtcgcgaccgatcagcagatggcaggcacgacgctgaaggtcgaagtcaatcgcgatcag
gcctcgcgttacggcctgacgcccgacgaggtcgatgcgacgctttatgatgcgttcggc
cagcggcaggtcgcgcagtacttcacgcagcagaacagctaccacgtcatcatggaagca
tcacccgaggtgcaggccgatccgcacagcctcgacaagctttacatccactcgccgacg
accggcggcctcatcccgctcgggacgatcgcttcgtggacgacgcgcaagaccgaaccg
ctgtcgatctcgcatcaggggcagtttccggccgtaacgatcagcttcaatctcgcgccc
ggcgcttcgctcggcacggcgaccaaccagatcagggccgctgagcgcgagttgcgcctg
ccggcctcgatgcagacgacattccagggcaacgctcaagccttccaggcatcgctgacg
acgatcccgctgttgatcgcagcggcgcttttcgtcgtctatctgatcctcggtatcctc
tacgagagctacattcacccgatcaccatcctgtccacgttgccatcggcgggtgcgggt
gcgctcatcaccttgatgctgttcggcttcgacttcagcctggtcgccatgatcggcgtt
atcctgttgatcggcatcgtcaagaagaacggcatcatgctcgtcgacttcgccattcac
gccgagcgcaacgagcacctgtcgccggtcgaagccatccgcaaggcggcgctgctgcgg
ttccgcccgatcatgatgacgacacttgcggccctgctcggtggcgtcccgctgatgatc
ggtgccggaaccggcgctgaaatccgccagccgcttggctatgcgatggtcggtggtctt
gcgatcagccagatcctgacgctcttcacgacgcctgttatttttctgtacatggatcgg
ttgtcgaattggctgacgaaaccggcggaggacactaaggcgccgagtgacaaggcgggt
cctgcgagcgccgcgcccgcgccatag
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