Hyphomicrobium sp. MC1: HYPMC_4515
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Entry
HYPMC_4515 CDS
T01557
Symbol
xerC
Name
(GenBank) ptyrosine recombinase xerC, integrase/recombinase Ripx (xerC)
KO
K03733
integrase/recombinase XerC
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmc03036
]
HYPMC_4515 (xerC)
Chromosome and associated proteins [BR:
hmc03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HYPMC_4515 (xerC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF6352
Phage_int_SAM_2
DIMCO_N
EACC1
Motif
Other DBs
NCBI-ProteinID:
CCB67724
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All DBs
Position
4345678..4346700
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AA seq
340 aa
AA seq
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MLTEPAKGREASQGGPVAQSLDDILAGDAELPLGGDLKRVVEGWLDHIVIERGQSAATRE
AYARDARQFLAFLKSYLGHPPCLADLERLDARTLRAFLANRRKAGLTSRSLARSLSALRT
FFRWLEREDTLQNQAVLQVAAPKIPHSIPKPLTVEGAASLIERDASDEEKEWIAARDTAV
LLLLYGAGLRISEALSLTPKTAPINGRDIMHIRGKGGKERLVPALAVVSDAITTYMGLCP
YPLEADGPLFRGTRGGPLSPRLIQLAMEKLRRTLGLPDTATPHALRHSFATHLLSAGADL
RQIQELLGHASLSTTQVYTEVNRDRLLAVYDQAHPRAARR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaccgaacctgcgaagggtcgtgaggcttctcaaggtgggccggtggcacaatcg
ctcgacgacattctggcaggcgacgcggagctgccgctcggtggcgacctcaagcgcgtg
gtcgagggatggctcgatcatatcgtcatcgagcgggggcagagcgcggcgacgcgcgag
gcctatgcgcgcgacgcccggcagtttcttgccttcctcaaatcgtatctcgggcatccg
ccgtgtctcgccgatctcgaacggctcgacgcgcgaacgcttcgtgcctttctggcaaac
cggcgcaaggccggtttgacatcgcgatccctcgcgcgatcgctgtcggcgctgaggaca
ttctttcgctggctggaacgcgaagatacgctgcaaaaccaggctgttttgcaagtcgca
gcgccaaaaattccgcattcgattccgaagccgctgacggtcgagggtgcagcgtcgctg
atcgaacgggatgcgagcgatgaagaaaaagaatggatcgcggcgcgcgatacggctgtg
ctgctgctgctctacggtgccggtttgcgcatcagcgaagccttgagtctcacgccgaag
accgccccgatcaatggccgcgatatcatgcacatccgcggcaaaggcggcaaagaacgg
ctcgtcccagcactggccgtcgtgtcggacgcgatcaccacgtacatggggctttgtccc
tatccgctggaggctgatggcccgctgtttcgggggaccaggggcggcccgttgtcgccc
cggctcatccagcttgcgatggaaaaactgcggcggacgcttggcttaccggatactgcg
acgccgcatgcgctgcgccattcgttcgccacgcatttactttcggcgggggccgattta
cgccaaattcaggagcttttaggtcacgcctcactgtcgacgacgcaagtctatactgag
gtcaatcgagaccggctgctggccgtttacgaccaagcccatccacgggcggcgcggcgc
tga
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