Hyphomicrobium sp. MC1: HYPMC_4522
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Entry
HYPMC_4522 CDS
T01557
Symbol
lpd
Name
(GenBank) dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00010
Glycolysis / Gluconeogenesis
hmc00020
Citrate cycle (TCA cycle)
hmc00260
Glycine, serine and threonine metabolism
hmc00280
Valine, leucine and isoleucine degradation
hmc00310
Lysine degradation
hmc00380
Tryptophan metabolism
hmc00620
Pyruvate metabolism
hmc00630
Glyoxylate and dicarboxylate metabolism
hmc00640
Propanoate metabolism
hmc00670
One carbon pool by folate
hmc00785
Lipoic acid metabolism
hmc01100
Metabolic pathways
hmc01110
Biosynthesis of secondary metabolites
hmc01120
Microbial metabolism in diverse environments
hmc01200
Carbon metabolism
hmc01210
2-Oxocarboxylic acid metabolism
hmc01240
Biosynthesis of cofactors
Module
hmc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hmc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hmc_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
HYPMC_4522 (lpd)
00020 Citrate cycle (TCA cycle)
HYPMC_4522 (lpd)
00620 Pyruvate metabolism
HYPMC_4522 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
HYPMC_4522 (lpd)
00640 Propanoate metabolism
HYPMC_4522 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HYPMC_4522 (lpd)
00280 Valine, leucine and isoleucine degradation
HYPMC_4522 (lpd)
00310 Lysine degradation
HYPMC_4522 (lpd)
00380 Tryptophan metabolism
HYPMC_4522 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HYPMC_4522 (lpd)
00670 One carbon pool by folate
HYPMC_4522 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmc04147
]
HYPMC_4522 (lpd)
Enzymes [BR:
hmc01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
HYPMC_4522 (lpd)
Exosome [BR:
hmc04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
HYPMC_4522 (lpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
NAD_binding_8
FAD_oxidored
FAD_binding_2
HI0933_like
DAO
GIDA
Thi4
FAD_binding_3
Lys_Orn_oxgnase
AlaDh_PNT_C
3HCDH_N
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
CCB67731
UniProt:
F8JD04
LinkDB
All DBs
Position
complement(4350383..4351783)
Genome browser
AA seq
466 aa
AA seq
DB search
MAAYDLIVIGTGPGGYVCAIRAAQLGMKVAVVEKRATFGGTCLNIGCIPSKSMLHASHCY
DEAKHEFASMGIGTDPALDLAKMQAFKREGVKGNTDGVAYLLKKNKIDHHFGTGRIVKSG
QVAVTSPGGDTQTLETKSIVIATGSDVTRLPGIEIDEKRVVSSTGALDFETVPKKLLVVG
AGVIGLELGSVWRRLGSEVLVIEYLPRILPGMDAEVAKSFQRILEKQGIAFRLSSKVAGV
ETSDTGVVAKVEPAAGGVAETVDADAVLVAVGRVPYTEGLGLAEAGIALDAKKRVLVDGH
YQTNVTGVFAIGDVIAGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPSVIYTSPEVASV
GKTEEELKAAGIAYNVGKFPFTANGRAKAINQTAGFVKILADATTDRVLGVHIIGAVAGE
LIAEACVLMEFSGSAEDLARTCHAHPTFSEAMKEAALAVAKRAIHF
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggccgcatatgatctgattgttatcggcactggccccggcggttacgtgtgcgccatc
cgcgccgcccagctcggaatgaaagtcgccgtcgtcgagaagcgcgcaacctttggcggc
acctgcctcaacatcggctgcatcccgtcgaagtcgatgcttcacgcgtcacattgctat
gacgaggccaagcacgaattcgcgtcgatgggcatcggcaccgatcccgcgctcgatctc
gccaagatgcaggcgttcaagcgcgaaggcgtcaaaggcaacacagacggcgtcgcctac
cttttgaaaaagaacaagatcgatcatcacttcggcaccggccgcatcgtgaagtccggt
caggtcgcagttacctcacccggcggtgacacgcagacgcttgaaacaaaatcgatcgtc
atcgcgacgggctccgacgtgacccgcctgccgggcatcgagatcgacgagaagcgcgtc
gtctcgtcaaccggagcgctcgacttcgagaccgtgccgaaaaagctgctcgtcgtcggc
gcgggcgtcatcggacttgagctgggctctgtctggcgtcgtctcggctcggaagttctc
gtcatcgaatatctgccgcgcattctgcccggcatggacgccgaggtcgcaaagtcgttc
cagcgtattctcgaaaagcagggcatcgcattccgcctgtcgagcaaggttgcgggcgtc
gaaacatccgacaccggcgttgtcgccaaggtcgaaccggcggcgggcggcgttgccgaa
acggtcgatgccgacgccgttctcgttgccgttggccgcgtgccctacaccgaggggctg
ggcctcgccgaagccggcatcgcgctggacgccaaaaaacgcgtgctcgtcgatggccac
tatcagaccaacgtcaccggcgtttttgccatcggtgacgtgatcgccggaccgatgctc
gctcacaaggcggaggacgaaggcgtcgccgtcgccgagatcattgccggtcaggcgggg
cacgtgaactacgacgtgatcccgagcgtcatctatacaagtccggaggtcgcgagcgtc
ggcaagacggaagaagaactgaaggccgcgggcatcgcctacaacgttggcaagtttccg
ttcaccgccaacggccgcgccaaggcgatcaatcagacggcgggcttcgtgaaaatcctg
gcggatgcgacgaccgatcgcgtgctcggcgtccacatcatcggcgccgtcgcaggcgaa
ttgatcgccgaagcatgcgtgctgatggaattctcaggctcggccgaagatctggcgcgc
acttgccacgcgcatccgactttctccgaagcgatgaaagaagccgcccttgccgtcgcc
aagcgcgcgattcatttctga
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