Hyphomicrobium sp. MC1: HYPMC_4526
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Entry
HYPMC_4526 CDS
T01557
Symbol
sucD
Name
(GenBank) succinyl-CoA ligase, alpha subunit
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00020
Citrate cycle (TCA cycle)
hmc00640
Propanoate metabolism
hmc00660
C5-Branched dibasic acid metabolism
hmc00720
Other carbon fixation pathways
hmc01100
Metabolic pathways
hmc01110
Biosynthesis of secondary metabolites
hmc01120
Microbial metabolism in diverse environments
hmc01200
Carbon metabolism
Module
hmc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hmc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HYPMC_4526 (sucD)
00640 Propanoate metabolism
HYPMC_4526 (sucD)
00660 C5-Branched dibasic acid metabolism
HYPMC_4526 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
HYPMC_4526 (sucD)
Enzymes [BR:
hmc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
HYPMC_4526 (sucD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
CCB67735
LinkDB
All DBs
Position
complement(4356448..4357347)
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AA seq
299 aa
AA seq
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MSILVDKNTKVICQGITGSQGTFHTKQARAYGTEIVGGVTPGKGGSKHPDAELADIPLFD
SVGEAVAKTGATATSIYVPPPFAADAILEAIDAGVPLIVCITEGIPVMDMVRVKRALDGS
KSRLVGPNCPGLLTPDQCKIGIMPGNIFKNGSVGIVSRSGTLTYEAVKQTTDVGLGQTTA
VGIGGDPVKGTEFIDVLDMFLSDDETQSIIMIGEIGGSAEEDAADFLIQEAKKGRKKPMA
GFIAGVTAPPGRRMGHAGAIISGGKGKAEDKLAAMKAAGIAIAPSPAALGRTLVEVLKA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtctattcttgtcgacaagaatacgaaggtcatttgccaaggcattactggtagtcag
ggaacctttcacaccaagcaggcgcgtgcctacggcaccgaaatcgtcggcggcgtaacg
cccggcaagggcggctccaagcaccccgacgccgaactcgccgacattccgttgttcgat
agcgttggcgaagcggttgccaagacgggtgccaccgcaacctcgatctacgttcccccg
cccttcgcggccgacgccattctcgaagccatcgacgccggcgtgccgctgatcgtctgc
atcacggaaggtattccggtgatggacatggtccgcgtgaagcgtgcgctcgacggttcc
aaatcgcgccttgtcggacccaactgccccggacttctcacacccgatcaatgcaagatc
ggcatcatgcccggaaacattttcaagaatggctcggtcggcattgtatcgcgctcggga
acgctcacatatgaagccgtaaagcagacgacggacgttggcctcgggcagacgacggcc
gtcggcattggcggcgaccccgtcaaaggtacggaattcatcgacgtcctcgacatgttc
ctctccgacgacgaaacgcagtcgatcatcatgatcggcgaaatcggcggctccgccgaa
gaggacgcggctgactttctcatccaggaagcaaaaaagggccgcaaaaagccgatggca
ggcttcattgccggcgtgacggcgcctccgggccgccgcatgggccacgcgggcgcgatc
atctccggcggtaagggcaaggcggaagacaagcttgcggcgatgaaagctgcaggcatt
gccattgcgccgagccccgccgcgctcggccgtactcttgtcgaagtcttgaaggcttaa
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