Hyphomicrobium sp. MC1: HYPMC_4551
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Entry
HYPMC_4551 CDS
T01557
Symbol
trmE
Name
(GenBank) tRNA modification GTPase trmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmc03016
]
HYPMC_4551 (trmE)
Transfer RNA biogenesis [BR:
hmc03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HYPMC_4551 (trmE)
Prokaryotic type
Methyltransferases
HYPMC_4551 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AAA_28
ABC_tran
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CCB67760
UniProt:
F8JDU7
LinkDB
All DBs
Position
complement(4381180..4382532)
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AA seq
450 aa
AA seq
DB search
MNQSPPTPDATTIFALSSAPGRAGIAVIRISGPAAQGVLQRMVAPIPKPRVAAFRTIRHP
ETGEALDRAVVLWFAAPLSETGEDVVEFQVHGSRAVVAALLSALATMPDCRLAEPGEFAR
RAFENGKLDLAEVEGLADLVDAETDAQRRQALAQAGGALSKLYDGWRARLIEIAALTEAA
IDFSDEGDVSASSFAEARKRAEILAKEIAAHLDDGHRGEILRDGFRVALLGAPNAGKSSL
LNALARRDAAIVSAEAGTTRDVIEVRLDLGGLPVIVSDTAGIREAASEVEQEGIRRSLAA
ARDADLILWLTEKGEKDESIPPLGFSRETSLVIRSKADLPHESQMEPDFGDLAISAKTCA
GLDRLIAVISERAKQAVGSQTDPVITQARHRQALETALADVTAFLAESPESIELRAEDVR
RAAQALGRITGRVDVEDVLDQIFSRFCIGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaagccccccaacaccggatgcgacgaccatcttcgcgctctcgagcgcgccg
ggtcgcgcgggcatcgccgtcatccgcatttccggaccggctgcccagggcgtgctgcag
agaatggtggcgccgatacccaagccacgcgtcgctgcctttcggaccattcgtcatccc
gagacaggcgaagcgcttgaccgtgcggtcgtgctttggttcgcggcgcctttgtccgaa
acaggcgaagacgtcgtcgagttccaagtccacggcagccgcgccgtcgtcgctgcgctt
ctgtccgctttggccaccatgcccgactgccgcctggccgaacccggagagttcgcccgc
cgcgccttcgaaaacggcaagctcgatttggccgaagtcgaaggtttggctgacctcgtt
gatgccgaaaccgacgcccagcgccgccaggctctcgcccaggcaggcggcgcattgtcg
aaactctatgacggctggcgcgcgcgcctgatcgaaattgcagccctcaccgaggccgcc
atcgacttctccgacgagggcgacgtctcggcatcatcattcgccgaagcgcgaaaacgt
gcggaaatcttggcgaaagagatcgcggcgcatctcgatgacggtcatcgcggcgagatc
ctgcgcgacggcttccgcgttgctttgctgggcgcaccgaacgccggaaaatcttcgctg
ctgaatgcgcttgcgcgtcgtgatgcggccatcgtctccgccgaagccggaaccacgcgc
gacgtcatcgaagttcgcctcgatctcggcggtctgccggtcatcgtctccgacaccgcc
ggcattcgcgaagccgcaagcgaagtcgaacaggaaggcatccgccgcagcctggcggcc
gcccgcgacgccgatctgattctgtggctgacggaaaaaggtgaaaaagacgagtcgatt
ccaccgcttggcttttcacgtgaaacaagtcttgtaattcgttccaaagccgatcttcca
catgagtcgcagatggaaccggactttggcgatttggccatctccgcgaagacctgcgcg
ggtctcgaccgtctgatcgcagtcatctcagagcgtgcgaaacaggctgtcggctcgcaa
acggaccccgtcatcacccaggcgcgccatcggcaggccctcgaaacggccttggccgac
gtgaccgcttttctggctgaaagccccgagtccatagaactccgggccgaagatgtccgc
cgcgccgcccaggctctgggccggatcaccggccgcgtcgacgtcgaggacgtccttgac
caaatcttcagccgtttctgcatcggcaagtga
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